Gene SeD_A2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2354 
SymbolcobQ 
ID6871386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2230105 
End bp2231625 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content56% 
IMG OID642785446 
Productcobyric acid synthase 
Protein accessionYP_002216104 
Protein GI198243321 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1492] Cobyric acid synthase 
TIGRFAM ID[TIGR00313] cobyric acid synthase CobQ 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.066722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG CAGTTATGTT GCAGGGGACG GCATCCGACG TCGGCAAAAG TGTGCTGGCG 
GCGGGTTTAT GCCGCATTTT TTATCAGGAT GGTCTGCGTA CCGCGCCGTT TAAATCGCAA
AATATGGCGC TTAATTCTGG TATTACGTCG GATGGTAAAG AGATGGGGCG GGCGCAGATT
TTTCAGGCGG AAGCCGCGGG GATCACGCCA GATGTGCGTA TGAACCCGGT GCTGCTCAAA
CCGACCAGCG ATCGCCAGGC GCAGGTCGTG CTGATGGGGA AAGTGGCGAC CAATATGGAT
GCGGTGAGTT ACCATGACTA TAAACCGCGT TTGCGTGAGC AAATCCTTGC GGTCTATAAC
AGCCTGGCGC AGGAATATGA CGTTATTGTG CTGGAAGGCG CCGGAAGCCC GGCGGAAATC
AATCTGCGCG ATCGCGATAT CGTCAATATG GGAATGGCGG AAATGGCCCA GTGTCCGGTT
ATTCTGGTGG CGGATATCGA CCGAGGCGGC GTATTCGCCG CTATTTATGG CACGCTGGCG
CTGCTGCATA AACAGGAGCG TGACAGAGTA AAGGGCGTCA TTATCAACAA ATTCCGCGGC
GACGTGGCGC TACTCTATTC CGGTATCGAA CAAATCGAAT CGCTTACCGG CGTCCCGGTC
CTGGGAGTGA TGCCGTGGCT GGATGTGGAT CTGGAAGATG AAGATGGCGT CGCGCTGCAA
AACGATAAAT ATCGCGGTAA CGCCCCCCGT GATATCACTA TTGCCATTGT GCAACTGCCA
CATATTTCTA ACTTTACGGA TTTTAACGCT CTGGCGGCGC AGCCGGATGT GCGCATACGC
TATATTCGCC GCCCGGAAGC GTTGACTGAC GCTGATCTGG TGATCCTGCC GGGCAGTAAG
AATACGCTGA GCGACCTCGC CTGGCTGCGC GAAAGCGGGA TGGCGGATGC GCTATTGCAG
ACACATCGGC AGGGCGTGCC GGTGATGGGA ATTTGCGGTG GCTACCAGAT GCTGGGCGAC
ACTATTGTGG ATGAGGTGGA GTCGGGGCTG GGTACGCAGC CGGGCCTGGG GCTGCTTAAT
ACGATCACTC GCTTTGCACA GGATAAAATC ACGACGCAGG TTAACGCGAC AATGTCAGGC
GAGCTGCCCA GCTGGCTGGC TGCCGCGGCG GGGCTACCGG TACGCGGTTA TGAAATCCAC
ATGGGGGAAA CGGTGCTGCA GGAAGGATGC TGTACGGCCA TGACGTTACA GAAAAATGGA
TGCTCTGTGG CGGATGGCGC GGTCACCGCC GACGGACTGG CGTTTGGCAC TTACCTTCAC
GGCCTGTTTG ACAGCGATGC GTTTACCCGT GCGGTGGTCA ATGGGTTACG GGCACGAAAA
GGGCTTGCGC CGTGGGAAAC GACTTTTTGT TATGCGGAGC ATAAAGCGCG GCAATTTGAT
CTGCTGGCGG AAGCGATGCG GCAACATATT GATATTGATA AAATTTATAC CATCATGCAA
CAGCATCAGG AGCCGGTATG A
 
Protein sequence
MTQAVMLQGT ASDVGKSVLA AGLCRIFYQD GLRTAPFKSQ NMALNSGITS DGKEMGRAQI 
FQAEAAGITP DVRMNPVLLK PTSDRQAQVV LMGKVATNMD AVSYHDYKPR LREQILAVYN
SLAQEYDVIV LEGAGSPAEI NLRDRDIVNM GMAEMAQCPV ILVADIDRGG VFAAIYGTLA
LLHKQERDRV KGVIINKFRG DVALLYSGIE QIESLTGVPV LGVMPWLDVD LEDEDGVALQ
NDKYRGNAPR DITIAIVQLP HISNFTDFNA LAAQPDVRIR YIRRPEALTD ADLVILPGSK
NTLSDLAWLR ESGMADALLQ THRQGVPVMG ICGGYQMLGD TIVDEVESGL GTQPGLGLLN
TITRFAQDKI TTQVNATMSG ELPSWLAAAA GLPVRGYEIH MGETVLQEGC CTAMTLQKNG
CSVADGAVTA DGLAFGTYLH GLFDSDAFTR AVVNGLRARK GLAPWETTFC YAEHKARQFD
LLAEAMRQHI DIDKIYTIMQ QHQEPV