Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2354 |
Symbol | cobQ |
ID | 6871386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2230105 |
End bp | 2231625 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642785446 |
Product | cobyric acid synthase |
Protein accession | YP_002216104 |
Protein GI | 198243321 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1492] Cobyric acid synthase |
TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.066722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGG CAGTTATGTT GCAGGGGACG GCATCCGACG TCGGCAAAAG TGTGCTGGCG GCGGGTTTAT GCCGCATTTT TTATCAGGAT GGTCTGCGTA CCGCGCCGTT TAAATCGCAA AATATGGCGC TTAATTCTGG TATTACGTCG GATGGTAAAG AGATGGGGCG GGCGCAGATT TTTCAGGCGG AAGCCGCGGG GATCACGCCA GATGTGCGTA TGAACCCGGT GCTGCTCAAA CCGACCAGCG ATCGCCAGGC GCAGGTCGTG CTGATGGGGA AAGTGGCGAC CAATATGGAT GCGGTGAGTT ACCATGACTA TAAACCGCGT TTGCGTGAGC AAATCCTTGC GGTCTATAAC AGCCTGGCGC AGGAATATGA CGTTATTGTG CTGGAAGGCG CCGGAAGCCC GGCGGAAATC AATCTGCGCG ATCGCGATAT CGTCAATATG GGAATGGCGG AAATGGCCCA GTGTCCGGTT ATTCTGGTGG CGGATATCGA CCGAGGCGGC GTATTCGCCG CTATTTATGG CACGCTGGCG CTGCTGCATA AACAGGAGCG TGACAGAGTA AAGGGCGTCA TTATCAACAA ATTCCGCGGC GACGTGGCGC TACTCTATTC CGGTATCGAA CAAATCGAAT CGCTTACCGG CGTCCCGGTC CTGGGAGTGA TGCCGTGGCT GGATGTGGAT CTGGAAGATG AAGATGGCGT CGCGCTGCAA AACGATAAAT ATCGCGGTAA CGCCCCCCGT GATATCACTA TTGCCATTGT GCAACTGCCA CATATTTCTA ACTTTACGGA TTTTAACGCT CTGGCGGCGC AGCCGGATGT GCGCATACGC TATATTCGCC GCCCGGAAGC GTTGACTGAC GCTGATCTGG TGATCCTGCC GGGCAGTAAG AATACGCTGA GCGACCTCGC CTGGCTGCGC GAAAGCGGGA TGGCGGATGC GCTATTGCAG ACACATCGGC AGGGCGTGCC GGTGATGGGA ATTTGCGGTG GCTACCAGAT GCTGGGCGAC ACTATTGTGG ATGAGGTGGA GTCGGGGCTG GGTACGCAGC CGGGCCTGGG GCTGCTTAAT ACGATCACTC GCTTTGCACA GGATAAAATC ACGACGCAGG TTAACGCGAC AATGTCAGGC GAGCTGCCCA GCTGGCTGGC TGCCGCGGCG GGGCTACCGG TACGCGGTTA TGAAATCCAC ATGGGGGAAA CGGTGCTGCA GGAAGGATGC TGTACGGCCA TGACGTTACA GAAAAATGGA TGCTCTGTGG CGGATGGCGC GGTCACCGCC GACGGACTGG CGTTTGGCAC TTACCTTCAC GGCCTGTTTG ACAGCGATGC GTTTACCCGT GCGGTGGTCA ATGGGTTACG GGCACGAAAA GGGCTTGCGC CGTGGGAAAC GACTTTTTGT TATGCGGAGC ATAAAGCGCG GCAATTTGAT CTGCTGGCGG AAGCGATGCG GCAACATATT GATATTGATA AAATTTATAC CATCATGCAA CAGCATCAGG AGCCGGTATG A
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Protein sequence | MTQAVMLQGT ASDVGKSVLA AGLCRIFYQD GLRTAPFKSQ NMALNSGITS DGKEMGRAQI FQAEAAGITP DVRMNPVLLK PTSDRQAQVV LMGKVATNMD AVSYHDYKPR LREQILAVYN SLAQEYDVIV LEGAGSPAEI NLRDRDIVNM GMAEMAQCPV ILVADIDRGG VFAAIYGTLA LLHKQERDRV KGVIINKFRG DVALLYSGIE QIESLTGVPV LGVMPWLDVD LEDEDGVALQ NDKYRGNAPR DITIAIVQLP HISNFTDFNA LAAQPDVRIR YIRRPEALTD ADLVILPGSK NTLSDLAWLR ESGMADALLQ THRQGVPVMG ICGGYQMLGD TIVDEVESGL GTQPGLGLLN TITRFAQDKI TTQVNATMSG ELPSWLAAAA GLPVRGYEIH MGETVLQEGC CTAMTLQKNG CSVADGAVTA DGLAFGTYLH GLFDSDAFTR AVVNGLRARK GLAPWETTFC YAEHKARQFD LLAEAMRQHI DIDKIYTIMQ QHQEPV
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