Gene SeD_A2350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2350 
Symbol 
ID6875883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2226719 
End bp2227648 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content53% 
IMG OID642785442 
Producthypothetical protein 
Protein accessionYP_002216100 
Protein GI198244687 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00214407 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00290758 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCGTA TCACACCTTT TTTTCCGTTT TTCGTCTTGT TGGTAAGCCA TTTCTCGCTG 
GCTATAAGCT ATCCGTTGCC GCCCGAAGGC AGTCGTCTGG TAGGACAGCC TGTCACAATC 
GCCGTACCGC AGAACAATAC TCAGCCCTTA GAGTCATTTG CCGCCCGCTA CGGTCAGGGG 
CTGAGTAATA TGCTTGAAGC GAATCCCGGC GTGGATGTGT TTTTACCTCA GTCTGGTTCC 
ACACTGGTGG TGCCGCAGCA GTTGATTCTG CCTGACACCG TTCGTGAAGG TATTGTGGTA 
AACGTCGCCG AGATGCGCCT TTATTATTAT CCCGCAGGCA CGAATACGGT TGAGGTGCTA 
CCTATTGGTA TTGGTCAGGC TGGCCGTGAA ACGCCGCGCA ACTGGGTAAC TGCGGTTGAA 
CGCAAACAAG ATGGCCCGGT TTGGGTGCCA ACGGCTAATA CGCGTCGGGA ATATGCTAAA 
GAGGGAAAAA CGCTGCCCGC GATGGTGCCT GCGGGGCCGG ATAACCCTAT GGGGCTATAC 
GCAATATATA TCGGCAGGTT ATATGCCATC CATGGCACTA ACGCTAACTT TGGCATTGGC 
CTTCGCGTCA GTCAGGGCTG TATCCGTTTA CGCAATGACG ATATTAAATA TTTATTCGAC 
CATGTTCCTG TAGGAACCCG CGTTCAGATT ATCGACAGGC CCGTTAAATT TTCGGTAGAG 
CCGGATGGCA GTCGTTGGCT GGAGGTACAC GAACCGCTTT CTCGCAACCG TGCTGAATTT 
GAGTCAGACA AAAAAGTTCC ATTGCCCGTT ACGCCAGTGC TGCGCACGTT TATCAAAGGG 
GATGACGTTG ATACTTCGCG GGTTAATGAG GTGCTGGAGC GCCGTTCCGG AATGCCGGTC 
AACATTAGCG CGGGCAGGCC TGGCCTTTAA
 
Protein sequence
MRRITPFFPF FVLLVSHFSL AISYPLPPEG SRLVGQPVTI AVPQNNTQPL ESFAARYGQG 
LSNMLEANPG VDVFLPQSGS TLVVPQQLIL PDTVREGIVV NVAEMRLYYY PAGTNTVEVL 
PIGIGQAGRE TPRNWVTAVE RKQDGPVWVP TANTRREYAK EGKTLPAMVP AGPDNPMGLY 
AIYIGRLYAI HGTNANFGIG LRVSQGCIRL RNDDIKYLFD HVPVGTRVQI IDRPVKFSVE 
PDGSRWLEVH EPLSRNRAEF ESDKKVPLPV TPVLRTFIKG DDVDTSRVNE VLERRSGMPV 
NISAGRPGL