Gene SeD_A2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2301 
Symbol 
ID6875659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2185946 
End bp2186935 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content46% 
IMG OID642785398 
Productintegrase protein 
Protein accessionYP_002216060 
Protein GI198245719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.054386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value1.04073e-17 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTCGCA AACGTGCGCC CGGTAATGAG TGGATGCCAA AGGGTGTATT CTTTCGCCCT 
TCTGGTTACT ACTGGAAACC GGGAGGATCA ACAGAAAATA TAGCTCCAGC TGATGCAACT 
AAAGCTGAGG TCTGGGTGGC TTACGAAAAA AAAGTTGAGG GTAGAAAAAA CAGAATTACA 
TTCATACAAT TATGGCGAAA ATTTCTTGCC AGTGCCGATT ATGCTGATCT GGCCCCAAGA 
ACGCAGAAAG ATTATCTGGC ACATGAGAAA TATATACTTG CCGTATTTGG TGATGCCGAA 
GCTAAAGCAA TAAAGCCAGA ACATATCCGG CGTTATATGG ATGCCCGTGG GCAAAAAAGC 
CGTGTCCAGG CGAATCATGA ACACAGCTCT ATGTCGCGCG TATTTCGTTG GAGTTATCAA 
CGTGGTTATG TTCCTGGTAA TCCTTGCGTT GGTGTGGATA AGTTTCCTAA GCCTCAACGC 
GATCGATATA TTACCGATGA AGAGTACAGA GCGATATATA ATAACGCAAC GCCAGCCGTC 
AGGGCTGCAA TGGAAATAGC TTATTTATGT GCTGCCAGAG TTTCTGATGT ATTGAAAATG 
AACTGGAATC AAATACTGGA GAAAGGAATT TTTATTCAGC AAGGAAAAAC CGGAGTTAAA 
CAAATTAAAT CCTGGACAGA TCGCTTACGT GATGCCGTTG AAATATGTCG TGAATGGGGA 
GAGGAAGGCC CTGTTATCAG GACTATGTAT GGCGAGCGTT ATTCTTATAA AGGATTTAAC 
GAGGCGTGGA GAAAGGCGCG AAAGGCTGCG GGGGATGATC TGGGACGTCC TCTTGACTGC 
ACTTTCCACG ATCTAAAGGC AAAGGGGATT TCAGACTATG AGGGAACGGC GAAAGACAAG 
CAGAAGTACA GTGGCCACAA AACCGAATCC CAGGTTCTGG TTTACGATCG CAAGGTGAAA 
ATGAGCCCAA CCCTGGACAG GAAGCGTTGA
 
Protein sequence
MGRKRAPGNE WMPKGVFFRP SGYYWKPGGS TENIAPADAT KAEVWVAYEK KVEGRKNRIT 
FIQLWRKFLA SADYADLAPR TQKDYLAHEK YILAVFGDAE AKAIKPEHIR RYMDARGQKS 
RVQANHEHSS MSRVFRWSYQ RGYVPGNPCV GVDKFPKPQR DRYITDEEYR AIYNNATPAV 
RAAMEIAYLC AARVSDVLKM NWNQILEKGI FIQQGKTGVK QIKSWTDRLR DAVEICREWG 
EEGPVIRTMY GERYSYKGFN EAWRKARKAA GDDLGRPLDC TFHDLKAKGI SDYEGTAKDK 
QKYSGHKTES QVLVYDRKVK MSPTLDRKR