Gene SeD_A2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2279 
Symbol 
ID6871994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2172048 
End bp2173043 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content54% 
IMG OID642785377 
Producthypothetical protein 
Protein accessionYP_002216039 
Protein GI198241847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00859838 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value4.1808499999999996e-21 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCGTGA GAGCGTTACT GACCCCTGAA ATTGCTCCTC GTATGGGCGT TGTATTGTTC 
AGGCCGGGAT CGGAACTGAT GCCCCTGTTT ATGCAGGGGC GTGTTCTGCT TGAACCAGAG 
CCGGAGCAAT ATTCATCTTT CGCCTGCGGC GCGGTCCCGG CGGTATCACA GCCGCTGGCG 
GATGATCCTG CTGTTCGTGA TGTGTTCCGT AATGAGTCGG TTATCTATCG TGCTGGTGGT 
CTGGCTAGTC TGGAAAGCTG GCTACTCCGG GGGAATGGCT GTCAGTGGCC GCATTCAGAC 
TGGCACAGCG AACAGATGAC AACCATGCGC CACGCCCCGG GGGCAATTCG ACTGTGCTGG 
CACTGCGATA ACCTGCTGCG CGAACAGTTT ACGGAACGGC TGAAATCAAT AGCTGTGGAG 
AACACGACAA AATGGGTTTT ATCGGTTGTT TGTCGTGATC TGGGTTTTGA CGATATGCAC 
GCAGTTACTC TCCCGGAACT GTGCTGGTGG ATGGTACGCA ATGACCTGGC AGAAGTCTTA 
CCGGAGAGCG CTGCGAGAAA AGCATTAAGG ATGCCGAAGG CAATTGTCCA GTCAGCTACC 
CGTGAAAGTG AAATTGTTCC CTCGGTGCTG GCCACCAGCA TTGTACAGGA TAAGGCGAAA 
AAGGTACTGG CGCTCAGGGT TGATCCGGAA TCGCCGGAAA GCTTCATGTT ACGTCCGAAA 
CGCCGTCGAT GGGTCAATGA GAGATATACC CGCTGGGTTA AATCCCAGCC GTGCGCCTGC 
TGCGGGAAGC AGGCGGATGA TCCGCACCAC CTGATAGGCT ACGGTCAGGT AGGGATGGGA 
ACAAAGGCGC ATGACCTCTT TGTGCTGCCG TTGTGCAGAA CGCATCACAA TGAATTACAT 
GCGGACACCG TGGCATTCGA AGAGAAATAC GGCTCTCAAC TGGAGTTGAT ATTTCGTTTT 
ATCGATCGCG CGCTGGCAAT TGGCGTGCTG GCGTAA
 
Protein sequence
MIVRALLTPE IAPRMGVVLF RPGSELMPLF MQGRVLLEPE PEQYSSFACG AVPAVSQPLA 
DDPAVRDVFR NESVIYRAGG LASLESWLLR GNGCQWPHSD WHSEQMTTMR HAPGAIRLCW 
HCDNLLREQF TERLKSIAVE NTTKWVLSVV CRDLGFDDMH AVTLPELCWW MVRNDLAEVL 
PESAARKALR MPKAIVQSAT RESEIVPSVL ATSIVQDKAK KVLALRVDPE SPESFMLRPK 
RRRWVNERYT RWVKSQPCAC CGKQADDPHH LIGYGQVGMG TKAHDLFVLP LCRTHHNELH 
ADTVAFEEKY GSQLELIFRF IDRALAIGVL A