| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2266 |
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| Symbol | |
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| ID | 6873640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2162344 |
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| End bp | 2163549 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642785366 |
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| Product | phage major capsid protein, HK97 family |
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| Protein accession | YP_002216028 |
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| Protein GI | 198242419 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0000000000739522 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGGTTG ATATTAAAGA TGTGGAACAG GTCGCGCAGG AACTGCAACA GAAGTTTGAC
GACTTCAAAG CAAAGAACGA CAAGCGCGTT GAGGCGATTG AGCAGGAAAA GGGCAAGCTT
GCCGGGCAGG TGGAAACCCT GAACGGGAAA CTCAGCGAGC TGGAAAATCT CAAAAGCGAC
CTTGAAAAAG AGCTGCTTGA GCTGAAACGT CCGGCACGTG GAGCGCAAAA CAAGGTGGCT
GCAGAACATA AAGACGCTTT CGTCGGCTTT CTGCGTAAAG GCCGCGAAGA CGGTCTGCGC
GATCTGGAGC GTAAGGCGTT GCAGGTGGGC ACTGATGAAG ATGGTGGTTA TGCCGTGCCG
GAAGAGCTGG ATCGCAGCAT TCTCAGCCTG CTGAAAGATG AGGTGGTGAT GCGCCAGGAG
GCCACGGTGA TCACCGTGGG CGGTTCCGAC TATAAAAAAC TGGTGAATCT GGGTGGTACG
GCTTCCGGAT GGGTCGGCGA AACTGACACG CGTTCCCAGA CCGCTACTTC CAGGCTGGGA
CTGATTGAGC CTTTCATGGG GGAAATCTAC GGCAACCCGC AGGCCACCCA GAAAATGCTG
GATGATGCCT TCTTCAACGT GGAAGCCTGG ATCAACAGTG AACTGGCGAC CGAATTTGCC
GAACAGGAGG AAATTGCCTT TACCACTGGT GACGGCACCA AGAAGCCGAA AGGGTTCCTG
GCCTATGAAT CCACCGAAGA GTCCGATAAG GCTCGTGCGT TCGGTAAACT TCAGCACATC
GTATCCGGTG AAGCGACCGC GGTGACCGCT GATGCCATCA TTAAGCTGAT TTACACGCTG
CGTAAGGCGC ATCGTACCGG CGCGAAGTTC ATGATGAACA ACAACAGCCT GTTTGCCATC
CGTCTGCTGA AAGATACCGA GGGTAACTAT CTGTGGCGTC CGGGGCTGGA ACTGGGACAG
CCATCCTCAC TGGCGGGTTA CGGTATCGCT GAAAACGAAC AGATGCCGGA TATCGCCGCC
GATGCGAAAG CCATTGCGTT TGGTAACTTC AAACGGGGTT ACACCATCGT TGACCGTATC
GGCACCCGCA TCCTGCGCGA CCCGTACACC AACAAACCGT TTGTCGGTTT TTATACCACC
AAGCGCACCG GGGGTATGCT GGTCGATTCA CAGGCTATCA AGCTGCTGAA AATCGCTGCG
GCGTAA
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| Protein sequence | MAVDIKDVEQ VAQELQQKFD DFKAKNDKRV EAIEQEKGKL AGQVETLNGK LSELENLKSD
LEKELLELKR PARGAQNKVA AEHKDAFVGF LRKGREDGLR DLERKALQVG TDEDGGYAVP
EELDRSILSL LKDEVVMRQE ATVITVGGSD YKKLVNLGGT ASGWVGETDT RSQTATSRLG
LIEPFMGEIY GNPQATQKML DDAFFNVEAW INSELATEFA EQEEIAFTTG DGTKKPKGFL
AYESTEESDK ARAFGKLQHI VSGEATAVTA DAIIKLIYTL RKAHRTGAKF MMNNNSLFAI
RLLKDTEGNY LWRPGLELGQ PSSLAGYGIA ENEQMPDIAA DAKAIAFGNF KRGYTIVDRI
GTRILRDPYT NKPFVGFYTT KRTGGMLVDS QAIKLLKIAA A
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