Gene SeD_A2234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2234 
Symbol 
ID6874519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2138139 
End bp2138972 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content49% 
IMG OID642785336 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_002215999 
Protein GI198245567 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.734266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCT TACTTATTTT GGTTGCCGTT TTATTGTTGA GCGGATGCTT AACTGCCCCG 
CCGAAACAAG CTGCGAAACC GACATTAATG CCCCGCGCAC AAAGTTACAA AGATTTGACG
CACTTACCTG CTCCCACCGG TAAGATCTTT GTTTCGGTAT ATAACATTCA GGATGAAACG
GGCCAATTTA AACCTTACCC GGCAAGTAAC TTTTCTACGG CTGTGCCGCA GAGCGCCACC
GCTATGTTGG TCACTGCGCT GAAAGATTCG CGCTGGTTTA TCCCGCTGGA ACGACAAGGC
TTACAGAATC TTTTGAATGA ACGGAAAATT ATTCGCGCAG CCCAGGAAAA CGGCACCGTG
GCGATGAATA ACCGTATCCC GCTTCAGTCG CTGACGGCGG CAAATATTAT GGTGGAAGGT
TCTATTATTG GTTATGAAAG TAACGTCAAA TCCGGCGGGG TCGGCGCAAG ATATTTCGGT
ATTGGCGCCG ATACGCAGTA TCAGCTGGAT CAGATTGCTG TCAACCTGCG CGTGGTTAAC
GTCAGTACAG GCGAGATCCT TTCTTCGGTG AACACCAGTA AAACAATCCT TTCCTATGAA
GTACAGGCAG GCGTGTTCCG TTTTATTGAT TACCAGCGCT TACTGGAAGG CGAAATCGGC
TATACCTCGA ACGAACCGGT GATGCTGTGT CTGATGTCAG CCATTGAAAC CGGCGTTATC
TTCCTCATTA ATGATGGTAT CGATCGCGGA CTGTGGGATT TGCAGAATAA AGCGGACAGG
CAAAATGATA TTCTGGTGAA ATACCGTGAG CTGTCAGTAC CGCCAGAATC CTGA
 
Protein sequence
MPRLLILVAV LLLSGCLTAP PKQAAKPTLM PRAQSYKDLT HLPAPTGKIF VSVYNIQDET 
GQFKPYPASN FSTAVPQSAT AMLVTALKDS RWFIPLERQG LQNLLNERKI IRAAQENGTV
AMNNRIPLQS LTAANIMVEG SIIGYESNVK SGGVGARYFG IGADTQYQLD QIAVNLRVVN
VSTGEILSSV NTSKTILSYE VQAGVFRFID YQRLLEGEIG YTSNEPVMLC LMSAIETGVI
FLINDGIDRG LWDLQNKADR QNDILVKYRE LSVPPES