Gene SeD_A2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2196 
SymbolflgD 
ID6874608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2107217 
End bp2107915 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content55% 
IMG OID642785298 
Productflagellar basal body rod modification protein 
Protein accessionYP_002215961 
Protein GI198243981 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.000763375 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATTG CCGTAAATAT GAATGACCCG ACCAACACGG GCGTCAAAAC GACGACCGGC 
AGCGGGTCGA TGACCGGAAG CAACGCTGCC GATCTGCAAA GCAGTTTCCT GACCTTACTG 
GTCGCGCAAT TGAAGAACCA GGACCCGACT AACCCATTAC AAAATAATGA GTTAACGACA 
CAGTTGGCGC AAATCAGTAC CGTGAGCGGC ATTGAAAAAC TGAATACGAC GCTGGGGGCT 
ATTTCCGGGC AAATCGATAA TAGTCAGTCC CTACAGGCGA CCACGCTGAT TGGACATGGC 
GTTATGGTGC CTGGCACCAC AATTCTGGCG GGTAAAGGCG CGGAAGAAGG GGCCGTGACG 
TCCACGACGC CGTTTGGCGT GGAATTGCAA CAGCCTGCGG ACAAAGTGAC GGCAACCATT 
ACCGATAAAG ATGGCCGGGT GGTACGGACG CTGGAGATCG GTGAGTTGCG AGCCGGGGTA 
CACACCTTTA CCTGGGATGG TAAGCAAACG GACGGAACAA CGGTACCGAA TGGTTCTTAC 
AACATTGCGA TTACCGCCAG CAATGGCGGA ACGCAACTGG TGGCGCAGCC GCTGCAATTC 
GCTCTGGTAC AGGGCGTGAC GAAGGGCAGT AACGGCAACC TGTTGGATCT GGGTACCTAC 
GGCACCACCA CACTCGACGA AGTTCGGCAA ATAATCTAA
 
Protein sequence
MSIAVNMNDP TNTGVKTTTG SGSMTGSNAA DLQSSFLTLL VAQLKNQDPT NPLQNNELTT 
QLAQISTVSG IEKLNTTLGA ISGQIDNSQS LQATTLIGHG VMVPGTTILA GKGAEEGAVT 
STTPFGVELQ QPADKVTATI TDKDGRVVRT LEIGELRAGV HTFTWDGKQT DGTTVPNGSY 
NIAITASNGG TQLVAQPLQF ALVQGVTKGS NGNLLDLGTY GTTTLDEVRQ II