| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2189 |
|---|
| Symbol | flgK |
|---|
| ID | 6871661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2099869 |
|---|
| End bp | 2101530 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642785291 |
|---|
| Product | flagellar hook-associated protein FlgK |
|---|
| Protein accession | YP_002215954 |
|---|
| Protein GI | 198241785 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1256] Flagellar hook-associated protein |
|---|
| TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0000358653 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCT TGATTAATCA CGCCATGAGC GGACTTAACG CCGCGCAGGC CGCGTTAAAT
ACGGTCAGTA ATAACATCAA CAATTATAAC GTTGCGGGTT ATACCCGGCA GACAACTATT
CTGGCGCAGG CAAACAGTAC GTTAGGGGCT GGCGGCTGGA TAGGTAATGG CGTTTACGTT
TCAGGCGTAC AGCGCGAATA TGATGCGTTT ATCACTAATC AGCTACGCGG CGCGCAAAAC
CAGAGCAGCG GCTTAACCAC GCGCTATGAA CAAATGTCGA AAATCGACAA CCTGCTGGCC
GATAAATCCA GCTCACTGTC TGGCTCGCTG CAGAGTTTTT TTACCAGCCT GCAAACGTTA
GTCAGTAACG CGGAAGATCC TGCGGCGCGT CAGGCGCTGA TTGGTAAAGC GGAAGGGCTG
GTAAACCAGT TCAAAACCAC CGATCAGTAT CTGCGCGATC AGGATAAACA GGTCAATATC
GCGATTGGCT CCAGCGTGGC GCAAATCAAC AATTACGCGA AGCAGATAGC TAACCTGAAC
GATCAAATCT CCCGTATGAC GGGCGTAGGC GCGGGCGCAT CGCCGAACGA CCTGCTCGAT
CAGCGTGATC AGTTGGTCAG CGAGCTTAAC AAGATCGTTG GCGTCGAGGT GAGTGTACAG
GACGGCGGCA CCTATAACCT GACGATGGCC AATGGCTATA CGCTGGTGCA GGGGTCGACG
GCGCGTCAGT TGGCGGCGGT TCCCTCCAGC GCCGACCCGA CGCGAACGAC TGTCGCTTAT
GTCGATGAGG CCGCCGGTAA CATCGAAATT CCGGAAAAGT TGCTGAACAC CGGTTCGCTC
GGCGGGCTAC TGACGTTCCG TTCTCAGGAT CTGGATCAGA CTCGTAATAC GCTGGGCCAG
TTGGCGTTGG CGTTTGCCGA TGCGTTTAAC GCGCAGCATA CCAAAGGTTA TGACGCCGAC
GGCAATAAAG GGAAAGACTT CTTTAGCATT GGCTCGCCGG TGGTATATAG CAACAGTAAT
AATGCCGATA AAACGGTATC GCTAACCGCT AAGGTGGTCG ACAGCACGAA GGTTCAGGCG
ACGGATTATA AGATTGTTTT TGACGGTACA GACTGGCAGG TTACTCGCAC TGCGGATAAC
ACCACCTTCA CGGCGACAAA AGATGCTGAC GGAAAACTGG AGATTGACGG TCTGAAAGTG
ACGGTAGGGA CCGGCGCACA GAAAAACGAC AGTTTTCTTC TCAAGCCGGT CAGCAATGCT
ATCGTCGACA TGAACGTTAA AGTGACGAAT GAAGCCGAGA TTGCGATGGC GTCTGAGTCA
AAACTCGATC CTGACGTGGA TACCGGCGAC AGCGATAACC GCAATGGTCA GGCATTGCTG
GACTTACAAA ACAGCAATGT AGTGGGCGGC AACAAAACTT TTAACGATGC TTACGCCACG
TTGGTCAGCG ATGTGGGTAA CAAAACGTCA ACGCTGAAAA CCAGCAGCAC CACGCAGGCG
AATGTGGTTA AACAGCTTTA TAAACAGCAA CAGTCGGTTT CCGGCGTTAA CCTCGACGAA
GAGTACGGCA ATTTGCAGCG TTATCAGCAG TATTATCTGG CGAATGCGCA AGTATTGCAG
ACCGCGAATG CGCTGTTTGA TGCGTTATTG AATATTCGCT AA
|
|---|
| Protein sequence | MSSLINHAMS GLNAAQAALN TVSNNINNYN VAGYTRQTTI LAQANSTLGA GGWIGNGVYV
SGVQREYDAF ITNQLRGAQN QSSGLTTRYE QMSKIDNLLA DKSSSLSGSL QSFFTSLQTL
VSNAEDPAAR QALIGKAEGL VNQFKTTDQY LRDQDKQVNI AIGSSVAQIN NYAKQIANLN
DQISRMTGVG AGASPNDLLD QRDQLVSELN KIVGVEVSVQ DGGTYNLTMA NGYTLVQGST
ARQLAAVPSS ADPTRTTVAY VDEAAGNIEI PEKLLNTGSL GGLLTFRSQD LDQTRNTLGQ
LALAFADAFN AQHTKGYDAD GNKGKDFFSI GSPVVYSNSN NADKTVSLTA KVVDSTKVQA
TDYKIVFDGT DWQVTRTADN TTFTATKDAD GKLEIDGLKV TVGTGAQKND SFLLKPVSNA
IVDMNVKVTN EAEIAMASES KLDPDVDTGD SDNRNGQALL DLQNSNVVGG NKTFNDAYAT
LVSDVGNKTS TLKTSSTTQA NVVKQLYKQQ QSVSGVNLDE EYGNLQRYQQ YYLANAQVLQ
TANALFDALL NIR
|
|---|
| |