Gene SeD_A2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2188 
SymbolflgL 
ID6875277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2098901 
End bp2099854 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content54% 
IMG OID642785290 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_002215953 
Protein GI198242414 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1.01663e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTATCA GTACCCAGAT GATGTACGAA CAAAATATGA GCGGCATCAC TAATTCTCAG 
GCCGAATGGA TGAAGCTGGG CGAGCAGATG TCTACCGGTA AGCGCGTTAC CAACCCATCT
GACGATCCGA TCGCCGCGTC GCAGGCGGTA GTACTCTCTC AGGCGCAGGC GCAGAATAGC
CAGTACGCCC TGGCGCGTAC GTTTGCCACC CAAAAAGTGT CGCTGGAAGA AAGCGTACTC
AGTCAGGTGA CGACGGCGAT TCAAACCGCG CAGGAAAAAA TCGTCTATGC CGGAAACGGC
ACGTTAAGCG ACGATGACCG CGCGTCGCTG GCGACGGATT TACAGGGGAT CCGCGATCAG
CTGATGAACC TGGCAAACAG CACTGACGGC AATGGTCGCT ATATCTTTGC CGGGTATAAA
ACGGAAGCGG CGCCATTCGA CCAGGCGACA GGTGGTTATC ATGGCGGCGA GAAAAGTGTT
ACCCAGCAGG TGGATTCCGC ACGCACGATG GTAATTGGCC ATACGGGAGC GCAAATTTTT
AATAGCATCA CCAGCAATGC GGTGCCGGAA CCGGATGGCT CGGACTCCGA AAAGAATCTG
TTTGTCATGC TCGATACGGC AATTGCCGCG CTCAAGACCC CGGTGGAAGG CAATGACGTG
GAAAAAGAAA AAGCCGCTGC CGCCATTGAT AAAACCAATC GCGGCTTAAA AAATTCGCTT
AATAACGTCC TGACCGTTCG TGCGGAACTG GGAACGCAAC TGAGCGAACT CAGTACGCTG
GATTCACTGG GAAGCGACCG TGCGCTGGGA CAGAAGTTGC AGATGAGCAA CCTGGTAGAT
GTGGACTGGA ACTCGGTCAT TTCCTCCTAC GTCATGCAAC AGGCGGCATT ACAGGCGTCC
TATAAAACGT TTACCGACAT GCAGGGAATG TCGCTTTTCC AGTTGAACCG GTAA
 
Protein sequence
MRISTQMMYE QNMSGITNSQ AEWMKLGEQM STGKRVTNPS DDPIAASQAV VLSQAQAQNS 
QYALARTFAT QKVSLEESVL SQVTTAIQTA QEKIVYAGNG TLSDDDRASL ATDLQGIRDQ
LMNLANSTDG NGRYIFAGYK TEAAPFDQAT GGYHGGEKSV TQQVDSARTM VIGHTGAQIF
NSITSNAVPE PDGSDSEKNL FVMLDTAIAA LKTPVEGNDV EKEKAAAAID KTNRGLKNSL
NNVLTVRAEL GTQLSELSTL DSLGSDRALG QKLQMSNLVD VDWNSVISSY VMQQAALQAS
YKTFTDMQGM SLFQLNR