Gene SeD_A2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2179 
Symbol 
ID6874539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2091206 
End bp2091727 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content52% 
IMG OID642785285 
Producthypothetical protein 
Protein accessionYP_002215948 
Protein GI198244444 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000145299 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00000000000156783 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAAGG TAAAATTACC CCTGACTCTT GATCCGGTTC GTACCGCTCA AAAACGCCTT 
GATTACCAGG GTATCTATAC CCCCGATCAG GTTGAGCGCG TTGCCGAATC TGTAGTCAGT
GTGGACAGTG ATGTGGAATG CTCCATGTCG TTCGCTATCG ATAACCAGCG TCTCGCCGTT
TTAACCGGCG ATGCGGTCGT TACGGTGTCG CTCGAATGCC AGCGTTGCGG GAAACCGTTT
ACCCATCAGG TTCACACAAC GTATTGTTTT AGCCCTGTCC GTTCCGACGA GCAGGCTGAA
GCACTGCCGG AAGCGTATGA GCCGATTGAG GTAAACGAAT TCGGCGAAAT CGATCTGCTG
GCGACGGTTG AAGATGAAAT CATCCTCGCC TTGCCGGTAG TTCCGGTGCA TGATTCTGAA
CACTGTGAAG TGTCCGAGGC GGACATGGTC TTTGGCGAAC TGCCTGATGA AGCGCAAAAG
CCAAACCCAT TTGCCGTATT AGCCAGCTTA AAGCGTAAGT AA
 
Protein sequence
MQKVKLPLTL DPVRTAQKRL DYQGIYTPDQ VERVAESVVS VDSDVECSMS FAIDNQRLAV 
LTGDAVVTVS LECQRCGKPF THQVHTTYCF SPVRSDEQAE ALPEAYEPIE VNEFGEIDLL
ATVEDEIILA LPVVPVHDSE HCEVSEADMV FGELPDEAQK PNPFAVLASL KRK