| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2170 |
|---|
| Symbol | |
|---|
| ID | 6874792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 2083366 |
|---|
| End bp | 2084388 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642785276 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002215939 |
|---|
| Protein GI | 198242090 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.7368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0000000000000363112 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TGTCAGGCGT TTTCCTTCTG CTGTTGGTTG TGCTGGGTAT TGCCGCGGGC
GTGGGGATGT GGAAAGTTCG CCATCTGGCG AACAGCACGT TACTTATTAA AAACGAGACT
ATCTTTACGC TCAAGGCGGG AACGGGGCGG CTGGCGCTTG GCGACCAGCT TTATGATGAA
AAAATCATTA ATCGCCCCCG GGTATTTCAG TGGCTGCTGC GCGTGGAGCC TGAGTTATCG
CACTTTAAAG CAGGAACTTA CCGTTTTACG CCGGGGATGA CCGTACGGGA GATGCTTGAG
TTGCTGGAGA GCGGCAAAGA AGCGCAATTC CCGTTGCGGT TTGTGGAAGG GATGCGCCTT
AGCGATTACC TGAAACAGCT ACGAGAGGCG CCGTATATTC GCCATACATT GCCGGATGAT
GACTACGCCA CTGTCGCTCA GGCATTAAAG CTTGCGCATC CGGAATGGGT AGAAGGGTGG
TTCTGGCCCG ATACCTGGAT GTATACCGCC AACACCAGCG ATGTCGCTAT TCTCAAGCGA
GCGCACCAAA AGATGGTGAA AGCTGTCGAT ACTGTCTGGA AAGGCCGGGC CGAGGGGCTG
CCTTATAAAG ATCAGAACCA ACTGGTGACA ATGGCCTCGA TTATTGAAAA AGAAACGGCT
GTCGCCAGCG AACGCGATCA GGTGGCCTCA GTCTTTATTA ATCGCCTGAG AATCGGTATG
CGCCTTCAGA CCGATCCCAC CGTGATTTAC GGAATGGGGA CGAGTTATAA TGGTAACTTG
TCGCGTGCGG ATCTGGAAAA GCCGACGGCT TATAACACGT ATACCATAAC CGGGCTGCCG
CCAGGACCGA TTGCATCGCC CAGCGAAGCG TCATTGCAGG CGGCGGCGCA TCCGGCGAAA
ACGCCGTATC TCTATTTTGT GGCCGACGGT AAAGGCGGTC ACACATTTAA CACCAATCTT
GCCAGCCATA ATCGGTCAGT GCAGGAGTAC CTGAAAGTGC TTAAGGAAAA AAATGGGCAG
TAA
|
|---|
| Protein sequence | MKKLSGVFLL LLVVLGIAAG VGMWKVRHLA NSTLLIKNET IFTLKAGTGR LALGDQLYDE
KIINRPRVFQ WLLRVEPELS HFKAGTYRFT PGMTVREMLE LLESGKEAQF PLRFVEGMRL
SDYLKQLREA PYIRHTLPDD DYATVAQALK LAHPEWVEGW FWPDTWMYTA NTSDVAILKR
AHQKMVKAVD TVWKGRAEGL PYKDQNQLVT MASIIEKETA VASERDQVAS VFINRLRIGM
RLQTDPTVIY GMGTSYNGNL SRADLEKPTA YNTYTITGLP PGPIASPSEA SLQAAAHPAK
TPYLYFVADG KGGHTFNTNL ASHNRSVQEY LKVLKEKNGQ
|
|---|
| |