Gene SeD_A2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2154 
Symbol 
ID6871462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2068254 
End bp2069219 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content57% 
IMG OID642785260 
ProductLysM/ErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_002215923 
Protein GI198243629 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00000396814 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCAACA ATACGCGACT CTCTCGCTGG TGGGCGTTGT TTGCGCTTAC CGCGACCATC 
ATGCTTGCCC TTCCCGCGCA GGCGAATACG TGGCCTCTTC CGCCCCCCGG CAGTCGACTG
GTGGGAGAAA ATAAATTCCA TGTCGTTGAA GACGACGGCG GCTCGCTGGA GGCGATCGCC
AAAAAATATA ACGTGGGCTT TTTAGCCCTG TTACAGGCCA ACCCCGGCAT TGATCCTTAC
GTGCCACGCG CAGGCAGCGT GCTGACGATT CCGCTGCAAA CGCTGCTACC GGACGCGCCA
CGTGAAGGGA TTGTCATTAA CCTCGCGGAA TTACGGCTTT ACTATTATCA ACCGGGGAAA
AATACGGTCA CGGTCTACCC TATCGGGATT GGCCAACTGG GCGGCGATAC CCTGACGCCA
ACGATGGTGA CGACCATTTC GGATAAACGC GCCAATCCAA CCTGGACGCC GACCGCCAAT
ATTCGCGCAC GTTATAAAGC GCAAGGCATC GATCTCCCCG CCGTGGTGCC TGCCGGTCCC
GATAACCCAA TGGGGCATCA CGCGATTCGT TTAGCGGCCT ACGGCGGCGT CTATCTGTTA
CATGGCACGA ATGCCGATTT TGGCATTGGT ATGCGCGTCA GTTCCGGCTG TATCCGTCTG
CGCGACGGTG ATATAGAGAC ATTGTTCCGT CAGGTCACGC CGGGAACCAA AGTGAATATT
ATCAATACGC CGATTAAAGC CTCGGTGGAG CCAGGCGGCG TGCGACTGGT GGAAGTTCAT
CAGCCGCTGT CTAAAAATAT AGGCGACGAT CCGCAGGTGC TGCCGATTGT GCTGAATGGC
CCGATGCAGG CCTTTAAGGA CGCGCCGCAG ACCGATGCTG CGGTGATGGA ACATGTTATG
GAAGTGCGTT CCGGAATGCC GGTGGATGTA ACCCGTCAAG CAGAGGCGAA ACCGCAGTCG
CTGTAA
 
Protein sequence
MFNNTRLSRW WALFALTATI MLALPAQANT WPLPPPGSRL VGENKFHVVE DDGGSLEAIA 
KKYNVGFLAL LQANPGIDPY VPRAGSVLTI PLQTLLPDAP REGIVINLAE LRLYYYQPGK
NTVTVYPIGI GQLGGDTLTP TMVTTISDKR ANPTWTPTAN IRARYKAQGI DLPAVVPAGP
DNPMGHHAIR LAAYGGVYLL HGTNADFGIG MRVSSGCIRL RDGDIETLFR QVTPGTKVNI
INTPIKASVE PGGVRLVEVH QPLSKNIGDD PQVLPIVLNG PMQAFKDAPQ TDAAVMEHVM
EVRSGMPVDV TRQAEAKPQS L