Gene SeD_A2147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2147 
SymbolnpdA 
ID6873576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2059405 
End bp2060226 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content53% 
IMG OID642785253 
ProductNAD-dependent deacetylase 
Protein accessionYP_002215916 
Protein GI198243292 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.180937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00193472 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGTCGC GTCGGTTTCA TCGATTAAGC CGCTTTCGTA AAAATAAACG TCTGTTGCGT 
GAACGTCTGC GCCAGCGGAT CTTTTTCAGA GACAGAGTGG TGCCGGAAAT GATGGAAAAC 
CCAAGAGTAT TAGTCCTTAC AGGTGCAGGA ATTTCTGCAG AGTCTGGTAT TCGTACGTTT 
CGCGCGGCGG ATGGCCTTTG GGAAGAGCAT CGGGTTGAAG ACGTGGCAAC GCCGGAAGGA 
TTCGCCCGTA ATCCGGGGCT GGTGCAGACA TTTTATAATG CCCGCCGTCA GCAGCTTCAA 
CAGCCGGAAA TACAACCCAA TGCGGCGCAT CTGGCGTTAG CGAAGCTTGA AGAAGCGCTT 
GGCGATCGCT TTTTGCTGGT GACGCAAAAC ATCGACAATT TGCATGAACG CGCGGGCAAT 
CGCAACATCA TTCATATGCA TGGCGAGCTG TTGAAGGTGC GCTGTTCGCA AAGCGGCCAG 
ATTCTGGAAT GGAACGGCGA TGTGATGCCG GAAGATAAAT GTCACTGCTG CCAGTTCCCG 
GCGCCGCTAC GTCCGCACGT GGTGTGGTTT GGCGAGATGC CGCTTGGCAT GGATGAAATT 
TATATGGCGC TGTCGATGGC GGATATTTTT ATCGCCATTG GCACATCCGG TCATGTCTAT 
CCGGCTGCGG GTTTTGTGCA TGAAGCAAAA CTGCACGGCG CACATACGGT GGAACTGAAT 
CTTGAGCCAA GCCAGGTCGG CAGCGAGTTT GAAGAGAAGC ACTACGGCCC GGCAAGCCAG 
GTTGTGCCGG AATTTGTTGA TAAATTCCTG AAAGGGCTGT AG
 
Protein sequence
MQSRRFHRLS RFRKNKRLLR ERLRQRIFFR DRVVPEMMEN PRVLVLTGAG ISAESGIRTF 
RAADGLWEEH RVEDVATPEG FARNPGLVQT FYNARRQQLQ QPEIQPNAAH LALAKLEEAL 
GDRFLLVTQN IDNLHERAGN RNIIHMHGEL LKVRCSQSGQ ILEWNGDVMP EDKCHCCQFP 
APLRPHVVWF GEMPLGMDEI YMALSMADIF IAIGTSGHVY PAAGFVHEAK LHGAHTVELN 
LEPSQVGSEF EEKHYGPASQ VVPEFVDKFL KGL