Gene SeD_A2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2133 
Symbol 
ID6875137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2045499 
End bp2046140 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content56% 
IMG OID642785239 
Producthypothetical protein 
Protein accessionYP_002215902 
Protein GI198242786 
COG category[R] General function prediction only 
COG ID[COG2915] Uncharacterized protein involved in purine metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.0109581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAAGA ATTATTATGA CATCACCCTC GCGCTGTCTG GCATTTGCCA GTCGGCACGC 
CTGGTGCAAC AACTGGCGCA CCAGGGGCAC TGTGATGCCG ACGCGTTGCA CGTTTCACTC
AACAGTGTCA TTGATATGAA TCCCAATTCT ACTCTGGGCG TGTTCGGCGG CAGCGAAGCT
AACCTGCGTC TTGGTCTGGA AACACTGCTC GGCGTGCTGA ATGCCAGCAG CCGACAAGGA
CTTAACGCCG AACTGACGCG TTATACGCTT AGCCTGATGG TGCTGGAGCG CAAGCTGTCA
TCCGCCAAAG GCGCGTTGAA TACGTTAGGC GATCGCATTA ACGGCCTGCA GCGCCAGCTT
GACCATTTTG ATTTACAGTC AGACACGTTA ATGAGCGCCA TGGCGGGCAT CTACGTGGAT
GTGATTAGCC CATTGGGCCC GCGCATTCAG GTGACGGGCT CCCCGGCCGT TCTGCAAAGT
CCGCAGGTGC AGGCCAAAGT CCGCGCCTCG CTACTGGCAG GCATCCGTGC AGCCGTGCTC
TGGCATCAGG TAGGCGGTGG TCGCCTACAG CTTATGTTTT CTCGTCATCG CCTGACGACT
CAGGCAAAAC AAATTCTTGC TCATTTAACC CCGGAGTTAT GA
 
Protein sequence
MAKNYYDITL ALSGICQSAR LVQQLAHQGH CDADALHVSL NSVIDMNPNS TLGVFGGSEA 
NLRLGLETLL GVLNASSRQG LNAELTRYTL SLMVLERKLS SAKGALNTLG DRINGLQRQL
DHFDLQSDTL MSAMAGIYVD VISPLGPRIQ VTGSPAVLQS PQVQAKVRAS LLAGIRAAVL
WHQVGGGRLQ LMFSRHRLTT QAKQILAHLT PEL