Gene SeD_A2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2092 
Symbol 
ID6873430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2015754 
End bp2016392 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID642785203 
Productleucine export protein LeuE 
Protein accessionYP_002215869 
Protein GI198242029 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0133634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00000159654 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTCGCGG AGTATGGTGT TCTGAATTAT TGGACGTACC TGGTCGGGGC GATTTTTATC 
GTTCTGGTAC CGGGGCCGAA TACGCTTTTT GTGCTTAAAA ATAGCGTGGG ACGCGGGGTT
AAAGGAGGAT ATCTTGCCGC ATGCGGCGTG TTTATCGGCG ATGCGATATT AATGTTTCTG
GCGTATGCGG GCGTGGCGAC GCTGATCAAA ACAACGCCGG TTCTGTTTAA CATTGTTCGC
TATCTCGGCG CGTTTTATCT GCTCTACCTT GGCGCAAAAA TCCTTTACGC CACTCTGACC
TCAAAAGGGC GTGCGGCGAC GGAAACGGTA GTTCCTTTTG GCGCTATTTT TAAGCGTGCT
TTAATTCTTA GCCTGACGAA TCCTAAAGCC ATACTTTTTT ATGTTTCCTT TTTTGTGCAA
TTTATTGATG TTACTGCGCC GCATACTGGC GTGTCATTTT TTATTTTGGC CACCACCCTT
GAAATTGTCA GTTTTTGCTA TCTGAGCTTT TTAATTCTTT CTGGCGCTTT TGTAACCCAC
TATATTGGTA CCAAAAAGAA ACTGGCAAAA GTGGGCAATT CTTTGATTGG CCTTCTTTTC
GTCGGGTTTG CCGCCCGCCT GGCAACGCTC CAGTCTTAA
 
Protein sequence
MFAEYGVLNY WTYLVGAIFI VLVPGPNTLF VLKNSVGRGV KGGYLAACGV FIGDAILMFL 
AYAGVATLIK TTPVLFNIVR YLGAFYLLYL GAKILYATLT SKGRAATETV VPFGAIFKRA
LILSLTNPKA ILFYVSFFVQ FIDVTAPHTG VSFFILATTL EIVSFCYLSF LILSGAFVTH
YIGTKKKLAK VGNSLIGLLF VGFAARLATL QS