Gene SeD_A2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2000 
Symbol 
ID6875130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1932623 
End bp1934065 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content54% 
IMG OID642785115 
Producthypothetical protein 
Protein accessionYP_002215781 
Protein GI198243364 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.407713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGT CTTTTACTGC CCGTTGGCGC GATGAACTGC CAGCAACGTA TACCGCGCTT 
TTACCCACAC CGTTAAAAAA TGCGCGACTG ATTTGGTATA ACGACAAACT GGCGCAGCAG 
TTAGCCATTC CCGCGTCGTT ATTTGACGCT ACCAATGGCG CTGGCGTTTG GGGCGGCGAA 
ACCTTATTAC CCGGTATGTC GCCTGTCGCG CAGGTATATA GCGGGCATCA GTTCGGCGTC 
TGGGCGGGAC AACTCGGCGA CGGACGCGGT ATTTTGCTGG GCGAACAGCT CCTGGCGGAT 
GGCTCGACCC TCGACTGGCA TCTGAAAGGC GCCGGATTAA CACCCTATTC GCGAATGGGG 
GATGGACGCG CCGTCCTGCG TTCAACCATA CGAGAAAGCC TTGCCAGCGA AGCCATGCAT 
TATCTGGGTA TTCCCACTAC GCGCGCGTTA TCTATCGTAG CCAGCGATAC GCCGGTTCAG 
CGAGAGACGC AGGAAACGGG CGCGATGTTA ATGCGTCTGG CGCAAAGTCA TATGCGTTTT 
GGTCATTTCG AACATTTCTA CTACCGCCGT GAGCCGGAAA AAGTTCAGCA ACTGGCTGAT 
TTCGCTATTC GTCATTACTG GCCGCAATGG CAGGATGTAG CGGAAAAATA TGCTTTGTGG 
TTTGAAGAGG TGGCGGCGCG TACCGGAAGA CTCATCGCCG AGTGGCAAAC TGTCGGTTTT 
GCGCACGGCG TTATGAATAC GGATAACATG TCGATTCTGG GGCTGACCAT CGACTATGGC 
CCCTTTGGTT TTCTCGACGA CTACGATCCC GGCTTCATTG GTAACCATTC CGATCATCAG 
GGACGTTACC GCTTCGATAA TCAACCGTCG GTGGCGCTGT GGAATTTACA ACGTCTGGCG 
CAGACGTTAA CCCCTTTTAT TGAGATCGAC GCGTTAAACA GAGCGCTGGA TCGTTACCAG 
GACGCGTTGT TAACGCACTA TGGGCAGCGA ATGCGCCAGA AGCTGGGTTT CTTTACCGAG 
CAAAAAGACG ATAACGCTTT ACTGAATGAA TTGTTTAGTC TGATGGCGCG CGAAGGGAGT 
GATTATACCC GTACATTTCG GATGTTAAGC CATACGGAGC AACAGAGCGC TTCCTCGCCG 
TTGCGGGATA CGTTTATCGA TCGCGCGGCG TTCGATGCCT GGTTCGACCA CTACCGGGCG 
CGATTGCGCA CAGAGGCGGT GGATGACGCG CTGCGCCAAC AGCAGATGCA ACGCGTGAAT 
CCTGCGATTG TGTTGCGCAA CTGGCTGGCG CAACGCGCGA TAGATGCGGC TGAACAAGGA 
GACATGGCGG AACTGCATCG GTTGCATGAA GTTTTACGTC AACCTTTTAC CGATCGAGAT 
GATGACTATG CCAGCCGACC GCCGGAGTGG GGAAAGCGGC TGGAGGTCAG TTGTTCAAGT 
TAG
 
Protein sequence
MTLSFTARWR DELPATYTAL LPTPLKNARL IWYNDKLAQQ LAIPASLFDA TNGAGVWGGE 
TLLPGMSPVA QVYSGHQFGV WAGQLGDGRG ILLGEQLLAD GSTLDWHLKG AGLTPYSRMG 
DGRAVLRSTI RESLASEAMH YLGIPTTRAL SIVASDTPVQ RETQETGAML MRLAQSHMRF 
GHFEHFYYRR EPEKVQQLAD FAIRHYWPQW QDVAEKYALW FEEVAARTGR LIAEWQTVGF 
AHGVMNTDNM SILGLTIDYG PFGFLDDYDP GFIGNHSDHQ GRYRFDNQPS VALWNLQRLA 
QTLTPFIEID ALNRALDRYQ DALLTHYGQR MRQKLGFFTE QKDDNALLNE LFSLMAREGS 
DYTRTFRMLS HTEQQSASSP LRDTFIDRAA FDAWFDHYRA RLRTEAVDDA LRQQQMQRVN 
PAIVLRNWLA QRAIDAAEQG DMAELHRLHE VLRQPFTDRD DDYASRPPEW GKRLEVSCSS