Gene SeD_A1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1970 
SymbolsufD 
ID6872944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1901825 
End bp1903096 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content54% 
IMG OID642785089 
Productcysteine desulfurase activator complex subunit SufD 
Protein accessionYP_002215755 
Protein GI198244393 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value8.06248e-08 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGGCT TACCGAACAG CAGTAAAGCG CTACAGCAAT GGCAGCATCT CTTTGAGGAA 
AAAAGAGAAA GTCGAACTGA GCAGGCAAGA CAACATTTAC AACAGATGTT ACGTCTGGGA
TTGCCGACGC GTAAACATGA AGACTGGAAA TACACGCCGC TGGAGGGCTT AACCCATAGC
CAGTTTATCC AGCAGTGTGC GACTATCAGC TCCGCACAGC GTGATGCGTT GGCGCTGCAA
ATCGATGCCG TGCGGCTGTT GTTTGTCGAT GGTCGGTTTA TGCCAGAGCT CAGTGATAGC
ACGCAAAACA GTGGATTTGA CGTTAGCGTC AGGGATGAGC GCCAGACGCT TGCCGCGCCG
GTACAGCCTG AGGTTTTTCT GCATCTGACG GAAAGCCTGG CGCAATGTGT CACGTATATA
CAGGTACGGC GAAATCAGCG TCCGACCAGG CCGCTACTGT TAATGCATAT CACGCAGGGC
GTGGATGGCG ACGAGCTGAA CACCGCGCAT TATCGCCACC ATCTGGCGCT GGCGGAAGGC
GCGGAAGCGA CGGTTATTGA GCATTATGTC AGCCTTACAG CGGCAAAACA TTTTACCGGC
GCGCGTCTGA CGATGAACGT TGCAGACAAT GCGCAACTGC ATCATATCAA ACTGGCGTTT
GAAAATGCGT CCAGCTATCA CTTTGCGCAT AACGATCTTC TGCTGGCGAC AGACGCCTCG
GCGTTTAGCC ACAGTTTTCT GCTGGGCGCC GCAGTGCTAC GTCACCACAG CAGCTCACAA
CTGAATGGTG AAAACGCGAC GCTTCGACTG AATAGTCTGG CGATGCCGGT GAAAAATGAA
GTTTGCGATA CGCGGACATG GCTGGAACAT AACAAAGGCT ACTGTAACAG CCGCCAGTCG
CACAAGACCA TCGTCAGCGA CAAAGGACGC GCGGTCTTTA ATGGCCTGAT TAACGTGGCG
CAACACGCCA TTAAAACCGA CGGCCAGATG ACCAATAATA ACCTGTTGTT GGGGAAACTG
GCTGAAGTCG ATACCAAACC GCAATTAGAG ATCTATGCCG ATGACGTGAA GTGCAGCCAC
GGCGCGACGA TCGGGCGTAT TGACGATGAG CAGATGTTTT ATCTGCAATC ACGCGGCATC
AGACAGCAGG AGGCGCGGCA CATGATTCTT TACGCGTTTG CCGCAGAGTT AACGGAAGCT
ATCCATGATA GCGCCCTTAA ACAGCAGGTG CTGGCGCGAA TCGGCCAGCG ACTGCCCGGA
GGCCTGGTAT GA
 
Protein sequence
MAGLPNSSKA LQQWQHLFEE KRESRTEQAR QHLQQMLRLG LPTRKHEDWK YTPLEGLTHS 
QFIQQCATIS SAQRDALALQ IDAVRLLFVD GRFMPELSDS TQNSGFDVSV RDERQTLAAP
VQPEVFLHLT ESLAQCVTYI QVRRNQRPTR PLLLMHITQG VDGDELNTAH YRHHLALAEG
AEATVIEHYV SLTAAKHFTG ARLTMNVADN AQLHHIKLAF ENASSYHFAH NDLLLATDAS
AFSHSFLLGA AVLRHHSSSQ LNGENATLRL NSLAMPVKNE VCDTRTWLEH NKGYCNSRQS
HKTIVSDKGR AVFNGLINVA QHAIKTDGQM TNNNLLLGKL AEVDTKPQLE IYADDVKCSH
GATIGRIDDE QMFYLQSRGI RQQEARHMIL YAFAAELTEA IHDSALKQQV LARIGQRLPG
GLV