| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1969 |
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| Symbol | |
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| ID | 6872221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1900608 |
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| End bp | 1901828 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642785088 |
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| Product | bifunctional cysteine desulfurase/selenocysteine lyase |
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| Protein accession | YP_002215754 |
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| Protein GI | 198243608 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0908482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0000000737026 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATTTC CTGTAGAAAA AGTACGGGCG GATTTTCCCA TACTGCAGCG TGAAGTTAAC
GGCCTGCCGC TGGCTTACCT GGACAGCGCA GCCAGCGCTC AAAAACCTAA TCAGGTGATT
GATGCTGAAT CTGCCTTCTA CCGTCACGGC TATGCTGCGG TACATCGAGG TATCCATACG
TTAAGCGTGC AGGCGACCGA AAGCATGGAG AATGTGCGTA AGCAGGCGTC GCGGTTTATT
AACGCCCGCT CCGCAGAAGA ACTGGTGTTC GTGCGCGGTA CGACGGAGGG CATTAACCTT
GTCGCCAACA GTTGGGGAAC GGAAAATATT CGCGCCGGGG ATAACATTAT CATCAGCGAG
ATGGAGCATC ACGCCAACAT CGTTCCCTGG CAGATACTGT GCGAGCGCAA AGGCGCTGAA
CTGCGCGTGA TCCCGTTGCA TCCTGACGGT ACGCTGCGGC TGGAGACCTT AGCTGCGCTG
TTCGATGACC GGACCCGGCT GCTGGCCATT ACCCATGTTT CCAATGTGCT GGGGACGGAA
AACCCACTGC CGGACATGAT TGCGTTGGCG CGCCAGCATG GGGCGAAAGT GCTGGTGGAT
GGCGCCCAGG CCGTGATGCA CCATGCTGTT GACGTCCAGG CGCTGGACTG CGATTTTTAC
GTTTTCTCCG GCCATAAACT TTACGGGCCG ACCGGCATCG GCATTCTGTA TGTTAAAGAG
GCGTTGCTGC AAGAAATGCC GCCGTGGGAA GGGGGCGGGT CGATGATCTC GACCGTCAGC
CTGACGCAGG GAACGACATG GGCGAAAGCG CCCTGGCGTT TTGAGGCGGG AACGCCGAAT
ACTGGCGGCA TCATCGGTCT CGGCGCGGCG ATTGACTATG TGACGTCGCT GGGACTGGAT
AAGATTGGCG ATTATGAGCA GATGCTGATG CGCTATGCGC TGGAGCAACT GGCGCAGGTG
CCTGATATCA CGCTGTATGG TCCGGCGCAG CGATTGGGCG TCATCGCGTT TAATCTGGGT
AAACACCATG CTTACGACGT CGGCAGCTTT CTTGATAATT ACGGTATCGC GGTACGAACG
GGACATCACT GCGCAATGCC GCTCATGGCC TGGTATGGCG TGCCGGCAAT GTGCCGGGCT
TCGCTGGCGA TGTATAACAC CCATGAAGAA GTGGACCGAC TGGTGGCAGG ATTAACGCGT
ATCCACCGCT TATTGGGATA A
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| Protein sequence | MTFPVEKVRA DFPILQREVN GLPLAYLDSA ASAQKPNQVI DAESAFYRHG YAAVHRGIHT
LSVQATESME NVRKQASRFI NARSAEELVF VRGTTEGINL VANSWGTENI RAGDNIIISE
MEHHANIVPW QILCERKGAE LRVIPLHPDG TLRLETLAAL FDDRTRLLAI THVSNVLGTE
NPLPDMIALA RQHGAKVLVD GAQAVMHHAV DVQALDCDFY VFSGHKLYGP TGIGILYVKE
ALLQEMPPWE GGGSMISTVS LTQGTTWAKA PWRFEAGTPN TGGIIGLGAA IDYVTSLGLD
KIGDYEQMLM RYALEQLAQV PDITLYGPAQ RLGVIAFNLG KHHAYDVGSF LDNYGIAVRT
GHHCAMPLMA WYGVPAMCRA SLAMYNTHEE VDRLVAGLTR IHRLLG
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