Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1909 |
Symbol | rnt |
ID | 6874498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1845699 |
End bp | 1846346 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642785032 |
Product | ribonuclease T |
Protein accession | YP_002215700 |
Protein GI | 198245565 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATA ACGCTCAACT TTCCGGTCTG TGCGACCGTT TTCGTGGTTT TTATCCTGTC GTCATCGATG TTGAAACTGC AGGATTTAAC GCTAAAACCG ATGCGCTGCT CGAAATCGCC GCCATCACGC TGAAAATGGA TGAACAAGGC TGGCTGATGC CGGACACGAC GCTGCATTTC CATGTGGAGC CGTTCGCTGG AGCCAACTTA CAGCCGGAAG CGCTTGCGTT TAACGGTATC GATCCCTCTA ACCCGCTACG CGGCGCGGTG AGTGAATATG AGGCGCTACA CGCTATTTTC AAAATGGTGC GTAAAGGTAT CAAAGACAGC GGTTGTAGCC GCGCCATTAT GGTCGCGCAT AACGCCACTT TTGATCACAG TTTTATGATG GCCGCCGCAG AGCGCGCCTC GCTGAAACGT AACCCGTTTC ATCCGTTCGT CACCTTTGAT ACCGCGGCAT TGAGCGGACT GGCGCTGGGG CAAACGGTGT TATCAAAAGC GTGCCTGGCG GCAGGTATGG AGTTTGATGG TGAAAAGGCC CATTCCGCTT TGTATGATAC CGAGCGGACA GCGGTGCTGT TTTGTGAAAT TGTCAATCGC TGGAAGCGCC TGGGCGGCTG GCCGTTACCT TTGCCGACGG ACAAATAA
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Protein sequence | MSDNAQLSGL CDRFRGFYPV VIDVETAGFN AKTDALLEIA AITLKMDEQG WLMPDTTLHF HVEPFAGANL QPEALAFNGI DPSNPLRGAV SEYEALHAIF KMVRKGIKDS GCSRAIMVAH NATFDHSFMM AAAERASLKR NPFHPFVTFD TAALSGLALG QTVLSKACLA AGMEFDGEKA HSALYDTERT AVLFCEIVNR WKRLGGWPLP LPTDK
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