Gene SeD_A1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1898 
Symbol 
ID6871096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1837206 
End bp1837673 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content55% 
IMG OID642785021 
Productouter membrane lipoprotein pcp 
Protein accessionYP_002215689 
Protein GI198243546 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.470796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC GTGTACTGGC CGTTTCACTG ATGGGGTTAT CCCTAGCGGG GTGTGTTAAC 
AATGATAGCC TTTCGGGTGA TGTTTATACC GCATCCGAGG CTAAACAAGT TCAGAATGTA 
ACGTACGGTA CTATCGTTAA CGTTCGTCCG GTTCAAATTC AGGGCGGTGA TGATTCTAAC 
GTGATTGGCG CTATCGGCGG CGCGGTGTTG GGCGGATTCC TCGGCAACAC TATCGGCGGC 
GGTACGGGTC GTTCACTGGC GACCGCGGCA GGCGCGGTGG CTGGCGGCGT AGCGGGCCAG 
GGCGTCCAGA GCGCAATGAA TAAAACCCAG GGTGTGGAAC TGGAAATTCG TAAAGACGAT 
GGCAACACCA TTATGGTTGT GCAGAAACAA GGAAATACGC GTTTCTCGGC AGGTCAGCGT 
GTCGTGCTGG CCAGCAACGG CAGCCAGGTT ACCGTCTCTC CACGCTAA
 
Protein sequence
MIKRVLAVSL MGLSLAGCVN NDSLSGDVYT ASEAKQVQNV TYGTIVNVRP VQIQGGDDSN 
VIGAIGGAVL GGFLGNTIGG GTGRSLATAA GAVAGGVAGQ GVQSAMNKTQ GVELEIRKDD 
GNTIMVVQKQ GNTRFSAGQR VVLASNGSQV TVSPR