Gene SeD_A1884 details

Gene Information

• Locus tag: SeD_A1884
• Symbol: rnfB
• ID: 6875633
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 1823786
• End bp: 1824364
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642785009
• Product: electron transport complex protein RnfB
• Protein accession: YP_002215677
• Protein GI: 198244365
• COG category: [C] Energy production and conversion
• COG ID: [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
• TIGRFAM ID: [TIGR01944] electron transport complex, RnfABCDGE type, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 72
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATACTA TCTGGATTGC CGTTGGCGCC CTGACCCTTC TGGGCCTGGT GTTCGGCGCC 
ATTCTGGGTT ATGCCTCCCG CCGATTCGCG GTTGAAGATG ATCCGGTTGT TGAAAAAATC 
GATGCGATTT TGCCGCAGAG CCAGTGTGGT CAGTGCGGCT ATCCCGGCTG CCGCCCCTAC 
GCCGAAGCCG TGGGTCTCCA GGGCGAGAAA ATCAATCGTT GCGCGCCCGG CGGCGAAGCC 
GTCATGCTGA AAATTGCAGA GTTGCTAAAC GTAGAGCCGC AGCCATGCGA TGGTGAAGAA 
CAGCAGGCCG CGCCAGTACG TATGCTGGCA GTTATTGATG AAAATAACTG CATTGGCTGC 
ACAAAATGCA TTCAGGCCTG CCCGGTTGAC GCCATCGTTG GCGCAACGCG CGCCATGCAC 
ACGGTCATGA GCGATCTCTG TACTGGCTGT AATCTGTGCG TCGATCCGTG TCCGACGCAC 
TGCATCGAAT TACGTCCGGT GAATGAGACG CCCGACAGTT GGAAATGGGA TTTGAACACC 
ATTCCCGTTC GCATCATTCC CGTGGAACAA CATGCTTAA 

 

Protein sequence

MNTIWIAVGA LTLLGLVFGA ILGYASRRFA VEDDPVVEKI DAILPQSQCG QCGYPGCRPY 
AEAVGLQGEK INRCAPGGEA VMLKIAELLN VEPQPCDGEE QQAAPVRMLA VIDENNCIGC 
TKCIQACPVD AIVGATRAMH TVMSDLCTGC NLCVDPCPTH CIELRPVNET PDSWKWDLNT 
IPVRIIPVEQ HA