Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1874 |
Symbol | fumC |
ID | 6875547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1812717 |
End bp | 1814120 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642785000 |
Product | fumarate hydratase |
Protein accession | YP_002215668 |
Protein GI | 198244445 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0300838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAACGG TACGCCGCGA GAAAGATTCA ATGGGCGCGA TTGAAGTCCC GGCAGATAAA CTGTGGGGGG CGCAGACTCA ACGTTCGCTG GAGCATTTTC GGATTTCCAC GGAGAAAATG CCCGTCTCGC TCATTCACGC TCTGGCGTTG ACCAAGCGCG CCGCTGCGAA GGTCAACCAG GACTTAGGGT TGTTGGCGGC GGAAAAAGCC AGCGCGATTA TCCAGGCGGC TGATGAAGTG CTGGCGGGAA AACATGCTGA TGAGTTTCCG CTGGCGATTT GGCAGACCGG GTCCGGTACG CAAAGCAACA TGAATATGAA TGAGGTGTTA GCGAACCGCG CCAGTGAAAT TTTGGGCGGC GTTCGCGGTA TGGAACGCAA GGTGCATCCC AATGATGACG TCAATAAGAG TCAAAGCTCA AACGATGTGT TCCCAACCGC CATGCACGTG GCGGCGTTAC TGGCGTTACG CGAACACCTT ATCCCGCAAT TATCCGCATT AACGGATACG CTTCGCGATA AATCCCACGC TTTCGCCGAT ATTGTCAAAA TTGGCCGTAC TCACCTGCAG GACGCGACGC CGCTCACCTT AGGCCAGGAG ATTTCCGGTT GGGTAGCCAT GCTGGAACAT AACCTCAGGC ATATTGAGCA CAGTTTACCG CACGTCGCGG AACTGGCGCT CGGCGGAACC GCAGTAGGGA CAGGGCTTAA TACCCACCCG GAATATGCCC GGCGCGTGGC CGAGGAACTG GCGACGATTA CCGCGGCGCC GTTTGTTACC GCCCCGAATA AATTCGAAGC GCTGGCGACC TGTGACGCGT TGGTACAGGC GCATGGCGCA TTAAAAGGAC TGGCGGCCTC GCTGATGAAA ATCGCCAACG ATGTTCGCTG GCTGGCGTCC GGCCCGCGCT GCGGCATTGG CGAGATTGCT ATCCCGGAGA ATGAGCCAGG CAGTTCCATT ATGCCTGGTA AAGTGAATCC GACCCAGTGT GAAGCGGTAA CGATGCTATG TTGCCAGGTG ATGGGTAACG ATGTGGCCAT CAATATGGGG GGCGCATCGG GCAACTTTGA GCTCAACGTC TATCGTCCGA TGGTTATTCA TAATTTTCTG CAAACGGTGC GCCTGCTGGC CGATGGCATG GCGAGTTTCA ATCAACACTG TGCGTCAGGA ATCGAGCCAA ACCGCGAGCG TATTACGCAG TTGCTGAATG AGTCGCTGAT GCTGGTCACT GCGCTCAATA CGCACATCGG TTACGATAAA GCGGCGGAGA TTGCGAAGAA GGCGCATAAA GAAGGGCTGA CGCTCAAAGC CTCAGCCGTG GCATTAGGAT ACCTTAGCGA CGAGGAGTTC GACGCCTGGG TACGTCCGGA GTTGATGGTT GGCAGTATGA CGCCGGGACG TTAA
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Protein sequence | MVTVRREKDS MGAIEVPADK LWGAQTQRSL EHFRISTEKM PVSLIHALAL TKRAAAKVNQ DLGLLAAEKA SAIIQAADEV LAGKHADEFP LAIWQTGSGT QSNMNMNEVL ANRASEILGG VRGMERKVHP NDDVNKSQSS NDVFPTAMHV AALLALREHL IPQLSALTDT LRDKSHAFAD IVKIGRTHLQ DATPLTLGQE ISGWVAMLEH NLRHIEHSLP HVAELALGGT AVGTGLNTHP EYARRVAEEL ATITAAPFVT APNKFEALAT CDALVQAHGA LKGLAASLMK IANDVRWLAS GPRCGIGEIA IPENEPGSSI MPGKVNPTQC EAVTMLCCQV MGNDVAINMG GASGNFELNV YRPMVIHNFL QTVRLLADGM ASFNQHCASG IEPNRERITQ LLNESLMLVT ALNTHIGYDK AAEIAKKAHK EGLTLKASAV ALGYLSDEEF DAWVRPELMV GSMTPGR
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