Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1840 |
Symbol | |
ID | 6875398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1778709 |
End bp | 1781147 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642784970 |
Product | anaerobic dimethyl sulfoxide reductase chain a |
Protein accession | YP_002215638 |
Protein GI | 198243690 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGAG AAAAGCAACA AACAGGCGTT AGCCGCAGGA CGTTAGTGAA ATCAGCGGCG CTTGGCTCAC TGGCGCTGGC TGCCGGAGGC GTATCTTTAC CGTTTGGGAT GCGTACCGCG GCCGCGGCGG TGCAGCAGGC TATGCGCAAC GAAGAAGATA AAATCGTCTG GGGCGCCTGT TCGGTCAACT GCGGCAGTCG CTGCGCCCTG CGTCTGCATG TAAAAGATAA TGAAGTCTGG TGGGTTGAAA CTGATAACAC TGGCGACGAT GTCTACGGCA ATCATCAGGT TCGCGCCTGC CTGCGGGGCC GTTCAATCCG TCGGCGTATT AACCATCCGG ATCGCCTTAA CTATCCCATG AAACGCGTTG GCCGCCGCGG CGAAGGCAAA TTTGAACGCA TTAGCTGGCA GGAAGCACTG GACACCATTA GCGCCAGCCT GAAAAAGACC GTAGAGACCT ACGGCAATGA AGCCGTTTAT ATCCACTATT CATCCGGCAT CGTAGGCGGC AACATAACCC GCTCGTCGCC TGCCGCCTCG CCGGTGAAGC GTTTGATGAA CTGCTACGGC GGTTCGTTGA ATCAATACGG CTCATACAGT ACCGCGCAAA TTTCTTGCGC CATGCCCTAC ACCTATGGTT CCAACGACGG CAACAGCACA TCTGATATCG AAAACAGTAA ACTGGTGGTC ATGTTCGGCA ATAATCCGGC TGAAACACGC ATGAGCGGCG GCGGCATTAC CTGGTTTCTG GAGCAAGCGC GTGAACGCTC AAATGCGCGC ATGATCGTAA TAGATCCGCG CTATACCGAT ACCGCTGCCG GACGTGAAGA CGAGTGGATA CCGATTCGCC CCGGCACCGA TGCCGCGCTG GTGGCGGGAA TTGCCTGGGT ATTGATTAAC GAAAATCTCG TTGACCAGCC TTTTCTCGAT AACTATTGTA TCGGCTACGA TGAAAAGACC CTTCCGGCTG ACGCGCCCCC CAATGGCCAT TATAAGGCTT ATATTTTGGG CCAGGGCGAG GACGGTATCG CCAAAACGCC GCAGTGGGCA TCGCATATTA CCGGCATCCC CGCCGATCGG ATTATCAAAC TGGCGCGCGA GATAGGCAGC GTCAAGCCGG CCTACATCTG TCAGGGTTGG GGCCCGCAGC GTCAGGCGAA CGGCGAACAA ACCGCTCGCG CCATCGCCAT GTTACCGATT CTGACCGGCA ACGTCGGCAT TCATGGCGGT AATAGCGGCG CACGCGAATC CACTTACACC ATTACCATTG AACGTCTGCC GGTCCTGGAG AATCCCGTTA AAACCACCAT CTCCTGCTTT AGCTGGACGG ACGCCATTGC GCGCGGCCCG GAAATGACCG CCCTGCGCGA CGGCGTACGC GGCAAAGATA AGCTGGATGT CCCGATCAAA TTTCTATGGA ACTACGCTGG CAACACCCTG ATTAATCAGC ATTCGGATAT TAATAAAACC CATGAAATTC TTCAGGATGA AACGAAATGC GAAATGATTG TGGTCATCGA CAATTTTATG ATCTCTTCCG CGAAGTACGC CGATATTTTA CTGCCGGATC TCATGACCGT CGAACAGGAA GATATCATCC CCAATGATTA CGCCGGCAAT ATGGGATATC TGATTTTTAT CCAACCGGCG ACGACGCCTA AGTTTGAACG CAAGCCCATC TACTGGGTAC TCAGCGAAAT CGCCAGACGC CTCGGCGACG ATGTGTATCA GCGGTTTACC GAAGGCCGTA CACAGGCGCA ATGGCTGCAA TATCTGTACG CCAAAATGCA GGCAAGAGAT CCGGCATTGC CCGCGTATGA CGATCTGAAA AAAATGGGCA TCTATAAACG CAAAGATCCC AACGGCCACT TTGTCGCCTA TAAAAAATTT CGTGAAGATC CGCAGGCCAA TCCGTTAAAA ACGCCGTCCG GTAAAATCGA AATCTACTCA AGCAAACTCG CTCACATCGC CAGTACCTGG GAGCTGGCGG AAGGCGACGT GATAAGCCCA CTGCCGATTT ATACCCCTAC TTTTGAAGGA TGGGACGATC CGAAGCGGAG CACCTTCCCG CTACAGCTGT TTGGCTTTCA CTATAAATCC CGTACCCATT CAAGCTACGG CAATATTGAT GTTCTGCAGG CCGCCTGTCG CCAGGAGGTG TGGATAAATC CGCTCGATGC GCAAAAACGT GGTATCGCGA ATGGCGATAA GGTTCGCGTC TTTAACGATC GTGGAGAGGT GCGTCTACCC GCCAAAGTCA CGCCGCGTAT TCTGCCGGGC GTCAGCGCGA TGGGTCAGGG CGCATGGCAT AATGCGGATA TGGCTGGCGA TAAAATTGAC CACGGCGCCT GCATCAATAC GCTCACGACG CTGCGTCCTT CCCCCCTGGC AAAAGGGAAT CCTCAACATA CAAATCTGGT GGAAATCGAA AAAATCTAA
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Protein sequence | MPGEKQQTGV SRRTLVKSAA LGSLALAAGG VSLPFGMRTA AAAVQQAMRN EEDKIVWGAC SVNCGSRCAL RLHVKDNEVW WVETDNTGDD VYGNHQVRAC LRGRSIRRRI NHPDRLNYPM KRVGRRGEGK FERISWQEAL DTISASLKKT VETYGNEAVY IHYSSGIVGG NITRSSPAAS PVKRLMNCYG GSLNQYGSYS TAQISCAMPY TYGSNDGNST SDIENSKLVV MFGNNPAETR MSGGGITWFL EQARERSNAR MIVIDPRYTD TAAGREDEWI PIRPGTDAAL VAGIAWVLIN ENLVDQPFLD NYCIGYDEKT LPADAPPNGH YKAYILGQGE DGIAKTPQWA SHITGIPADR IIKLAREIGS VKPAYICQGW GPQRQANGEQ TARAIAMLPI LTGNVGIHGG NSGARESTYT ITIERLPVLE NPVKTTISCF SWTDAIARGP EMTALRDGVR GKDKLDVPIK FLWNYAGNTL INQHSDINKT HEILQDETKC EMIVVIDNFM ISSAKYADIL LPDLMTVEQE DIIPNDYAGN MGYLIFIQPA TTPKFERKPI YWVLSEIARR LGDDVYQRFT EGRTQAQWLQ YLYAKMQARD PALPAYDDLK KMGIYKRKDP NGHFVAYKKF REDPQANPLK TPSGKIEIYS SKLAHIASTW ELAEGDVISP LPIYTPTFEG WDDPKRSTFP LQLFGFHYKS RTHSSYGNID VLQAACRQEV WINPLDAQKR GIANGDKVRV FNDRGEVRLP AKVTPRILPG VSAMGQGAWH NADMAGDKID HGACINTLTT LRPSPLAKGN PQHTNLVEIE KI
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