Gene SeD_A1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1839 
Symbol 
ID6871093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1778247 
End bp1778552 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content54% 
IMG OID642784969 
Productputative outer membrane protein 
Protein accessionYP_002215637 
Protein GI198245920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.549082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CAACTGCAAT AGCCGCTCTG GCGTTAGTCA GCGCCCCCTC GCTAGTAATG 
GCGGCACCGG GATCGTGCGA GAGAGTAAAA AGCGATATTG AACAACGTAT CATCAATAAC 
GGCGTGCCGG CGGATAATTT TACGCTCACT ATCGTTCCTA ACGACCAGGC CGATCAGCCG 
GACTCACAGG TGGTGGGCCA TTGCGCGAAC GACACGCATA AAATTCTTTA TACCCGCACC 
AACAGCGGCA ATGCGCCAGC CAATACCTCT CCCGCTCAGG ACGGTTCATC CGCCGAACCG 
CAATAA
 
Protein sequence
MKIATAIAAL ALVSAPSLVM AAPGSCERVK SDIEQRIINN GVPADNFTLT IVPNDQADQP 
DSQVVGHCAN DTHKILYTRT NSGNAPANTS PAQDGSSAEP Q