Gene SeD_A1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1806 
Symbol 
ID6873398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1751723 
End bp1752841 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content46% 
IMG OID642784941 
Productouter membrane protein N 
Protein accessionYP_002215609 
Protein GI198244950 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0174534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TAGTGGTGTT ATCTGCGGTA GCCGCAGCCG TAATGATGGC TGGAGCCGCC 
AACGCAGCAG AAATCTATAA CAAGGATGGC AATAAACTGG ATTTGTATGG CAAGGTCGAC
GGCCTGCATT ATTTTTCCAG TAATCATAGT ACGGATGGCG ATCAATCTTA TATCCGTATG
GGTATTAAAG GCGAGACTCA AATTACCGAT CAACTAACCG GTTTTGGACA GTGGGAGTAT
CAGGTCAACG CCAATCGTCC GGAAGATGGT GACTCCAGCG GTTCCCCGCA AAGCTGGACG
CGTCTCGGTT TTGCTGGTTT GGCATTTGCC GATATGGGGT CTGTTGATTA TGGTCGTAAC
TATGGCGTGT TATACGACAT TGGTTCATGG ACTGACGTAC TGCCTGAATT TGGTAATGAT
TCGTATGAAG CTTCCGATAA TTTTATGACC GGACGCGCGA ATGGCGTTCT GACTTATCGC
AATAATGATT TCTTTGGTCT GGTTGATGGT CTGAATATTG CGTTGCAGTA TCAGGGTAAA
AATGACGGCC TGTCGAAAGA AGGCGATCCT TTAAGTAATA ATGCCAGAAA AAGTATCGCG
TACCAGAATG GCGATGGTTT CGGGGCATCA GCGACATATG ATTTGGGCAT GGGGGTGAGC
CTGGGGGCAG CCTATACCAG TTCCAAACGC ACGCTTGATC AGATGACGCA AGATAAATAC
GACAATGGCG ACCGCGCTGA AGCCTGGACT GGCGGCGTGA AGTATGATGC CAATAATATT
TACCTGGCGG CAAACTATAC CCGTACTTAT GATATGACCT ATATGGGCGA TACATTGGGC
GGCTTTGCAC ATAAAACCGA TAACTGGGAA ATGGTAGGGC AATATCAATT TGATAATGGC
TTACGCCCGT CACTGGCATT CCTGCAATCC AGAGCCAATG ATGTTGATGG ACTGGGTTCG
TTCGACCTTG TGAAATATAT TGATGTGGGT TCCTATTACT ACTTCAATAA AAATATGTCC
GCGTATGTTG ACTACAAAAT CAATCTGCTA AAAGATGGCA ACCCATCGAA TCCTAATACA
GACAACACCG TGGCGCTCGG CTTAGTCTAC GAGTTTTGA
 
Protein sequence
MKKVVVLSAV AAAVMMAGAA NAAEIYNKDG NKLDLYGKVD GLHYFSSNHS TDGDQSYIRM 
GIKGETQITD QLTGFGQWEY QVNANRPEDG DSSGSPQSWT RLGFAGLAFA DMGSVDYGRN
YGVLYDIGSW TDVLPEFGND SYEASDNFMT GRANGVLTYR NNDFFGLVDG LNIALQYQGK
NDGLSKEGDP LSNNARKSIA YQNGDGFGAS ATYDLGMGVS LGAAYTSSKR TLDQMTQDKY
DNGDRAEAWT GGVKYDANNI YLAANYTRTY DMTYMGDTLG GFAHKTDNWE MVGQYQFDNG
LRPSLAFLQS RANDVDGLGS FDLVKYIDVG SYYYFNKNMS AYVDYKINLL KDGNPSNPNT
DNTVALGLVY EF