Gene SeD_A1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1795 
Symbol 
ID6872462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1741996 
End bp1742667 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID642784930 
Productputative regulatory protein 
Protein accessionYP_002215598 
Protein GI198242243 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATAC CTGAGGTCAG GCAGGAGAGG CTCTATCAGA AGATAGCCAA CCTCATCATT 
AAGCTGATCA ATGATAATAT TTTTCCCCCG GGAACTTTTT TACCGCCAGA ACGCGAACTG 
GCAAAACAGC TTGGCGTGAG CCGCGCCTCC TTGCGAGAAG CCCTTATTGT ACTGGAGATC 
TCCGGATGGA TCGTGATTCA GTCCGGTAAT GGGGTTATCG TTTCAGATAA AAAACACCTT 
GCCAGCGACT ATACCATCGA AGAAATTCTC TCTACTCGCG AGCTGGTTGA TAGCCATTGT 
GCGCGCTTAG CCGCACAAAA CGATAACGTT GACGTCATCA ACCAAATAGA GGCGATTTAT 
CATCGTATGG ATCAAGCCAT TAACGATAAT AACGTCCACG GCTTTTACTC GCTGGATAAA 
GAGTTTCACC TTGCGATCTC TGAGGCTAGC CGTAACCGGG TGTTGTTCGA TATGTCCCGT 
ATGTTATGGG AACAACGGAT TAATATCCCT TATGCCGGGC TTGATGAGCA GTCTGGAGAC 
AGAAATGTTT TACTTAATCT CAACAAACAA CATAAAGCGA TAGTGGATGC AATGCGCCAG 
TCTGATGCTG ACAGCGCTTA TGAGGGATCG CTGGAACATT TACGCTATGT GAGAAAGATT 
GTCGGCGGCT AA
 
Protein sequence
MVIPEVRQER LYQKIANLII KLINDNIFPP GTFLPPEREL AKQLGVSRAS LREALIVLEI 
SGWIVIQSGN GVIVSDKKHL ASDYTIEEIL STRELVDSHC ARLAAQNDNV DVINQIEAIY 
HRMDQAINDN NVHGFYSLDK EFHLAISEAS RNRVLFDMSR MLWEQRINIP YAGLDEQSGD 
RNVLLNLNKQ HKAIVDAMRQ SDADSAYEGS LEHLRYVRKI VGG