Gene SeD_A1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1753 
Symbol 
ID6872571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1691780 
End bp1692445 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content47% 
IMG OID642784890 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002215558 
Protein GI198245818 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTA CGGAAAAAAC ACAACATATA AGCCTGACCA CACAGGTTGA AAATCGGTTA 
AAGCATCAAT TGTCTATTGG CGCATTAAAA CCAGGCGCAA GGCTTATCAC TAAAAATATC
GCTCAAGAGT TAGGCGTCAG TATTACGCCA GTGCGTGAGG CCCTGTTAAG GCTGGTCTCT
TCCAGTGCTT TGGCGGTGGC GCCAGCACAG GCGTTTATGG TGCCGGAGAT CTCGCTGGAA
AGTTTGCTGG AAATTAATAC GATTCGTACT GCCCTGGAGG AGATGGCGGT GGTCGCCGCT
GCGGGTAAGA TTACCCCGGA TCGCGAGCAG ACGCTGAATG CGCTATTAGA TGAATTTCAA
CAGGCGCTGG AAAGTGGCGT TATGGAGAAA ATTCTTTTGG CCAACCGCGC ATTCCGCTTT
GAGATCTACC ACTACGCGGA TATGCCAACG CTGTATGCCA TGATCGAGCA ATTATGGGTA
CGCCTGGGGC CAAGTCTGCA TTTTTTATAT GATAATTTTA AACTTGATGA TTATCAAAAC
GGCGTTAATC TGTACAGAAA ATTGCTTAAT GCGTTAGTGA CTGGTGATAA AGAAGCCAGT
CGCCACTGCC TACAGAACGT TTTGCAACAA AACGTAGCGA CGATTAAAAA TCAGTACTTC
ATGTAA
 
Protein sequence
MPGTEKTQHI SLTTQVENRL KHQLSIGALK PGARLITKNI AQELGVSITP VREALLRLVS 
SSALAVAPAQ AFMVPEISLE SLLEINTIRT ALEEMAVVAA AGKITPDREQ TLNALLDEFQ
QALESGVMEK ILLANRAFRF EIYHYADMPT LYAMIEQLWV RLGPSLHFLY DNFKLDDYQN
GVNLYRKLLN ALVTGDKEAS RHCLQNVLQQ NVATIKNQYF M