Gene SeD_A1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1684 
Symbol 
ID6875170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1621654 
End bp1621992 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content41% 
IMG OID642784827 
Productmultidrug transporter EmrE 
Protein accessionYP_002215495 
Protein GI198241892 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.487331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.0413845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAG AAGCTGTAAT CTTTCTATTT ATCGCCATCG TGGTAGAAGT TATCGCCACG 
ATCTCATTAA AATTATCAGA TAGTTTTACG CGTCTGGTAC CGAGCCTCGT TACTATCATC
GGATATTGTA TTGCGTTCTG GTGTCTTACC ATCCCAATGC GAACCATCCC TGCGGGTATC
ATTTATGCTA TTTGGTCTGG GGTAGGGATT GTTCTTATTG GATTGATAGG ATGGTTATTT
CTCGGCCAAA AACTGGATAT GCCGGCTATT ATTGGCATGT TGCTTATCAT CTGCGGCGTA
ATCGTAATCA ATCTGTTTTC AAAAAGTGTC AGTCACTAG
 
Protein sequence
MTKEAVIFLF IAIVVEVIAT ISLKLSDSFT RLVPSLVTII GYCIAFWCLT IPMRTIPAGI 
IYAIWSGVGI VLIGLIGWLF LGQKLDMPAI IGMLLIICGV IVINLFSKSV SH