Gene SeD_A1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1650 
Symboltpx 
ID6871163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1592515 
End bp1593021 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content50% 
IMG OID642784794 
Productthiol peroxidase 
Protein accessionYP_002215462 
Protein GI198245820 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2077] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.103223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.00495137 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACAGA CTGTACATTT CCAGGGTAAC CCGGTCACCG TTGCCAACGT TATTCCGCAG 
GCTGGTAGCA AAGCACAGGC TTTTACTCTT GTCGCAAAAG ATTTGTCTGA CGTTTCCCTC 
AGCCAATATG CAGGCAAACG CAAAGTGCTG AATATTTTCC CAAGCATTGA TACTGGCGTA 
TGCGCCGCAT CAGTTCGTAA GTTTAATCAA CTGGCCACAG AAGTGGAGAA TACCGTCGTA 
TTGTGCGTTT CTGCTGACCT GCCTTTTGCA CAGTCGCGTT TTTGCGGCGC GGAAGGCCTG 
AGCAACGTTA TTACGCTTTC CACTCTGCGT AATAACGAGT TTCTGAAAAA CTACGGCGTC 
GAAATCGTTG ACGGCCCGCT GAAAGGTTTG GCGGCGCGCG CAGTCATCGT GCTTGACGAA 
AACGACAACG TTATTTTCAG CCAGTTGGTG GATGAAATCA CCCACGAGCC GGATTACGAC 
GCCGCGCTTA ATGTCCTGAA GGCATAA
 
Protein sequence
MSQTVHFQGN PVTVANVIPQ AGSKAQAFTL VAKDLSDVSL SQYAGKRKVL NIFPSIDTGV 
CAASVRKFNQ LATEVENTVV LCVSADLPFA QSRFCGAEGL SNVITLSTLR NNEFLKNYGV 
EIVDGPLKGL AARAVIVLDE NDNVIFSQLV DEITHEPDYD AALNVLKA