Gene SeD_A1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1584 
SymboloppD 
ID6871360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1530976 
End bp1531983 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content52% 
IMG OID642784731 
Productoligopeptide transporter ATP-binding component 
Protein accessionYP_002215399 
Protein GI198242840 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAT CAGAAACCGC AACTCAGGCG CCGCAACCGG CGAATGTACT GCTGGAGGTA 
AACGATCTTC GTGTTACGTT CGCTACGCCT GATGGCGATG TGACGGCGGT CAACGATCTG
AACTTTACGC TTCGCGCTGG AGAAACGTTA GGTATTGTTG GCGAGTCTGG ATCGGGGAAA
TCGCAAACGG CGTTCGCATT AATGGGACTG CTGGCGACGA ATGGTCGAAT CGGCGGTTCT
GCGACCTTCA ACGGACGTGA AATTCTTAAT CTACCTGAGC GCGAACTGAA TACGCTGCGC
GCAGAACAGA TTTCGATGAT TTTTCAGGAC CCGATGACCT CGCTAAATCC TTATATGCGC
GTTGGGGAGC AGTTAATGGA AGTCCTGATG CTGCATAAAG GGATGAGCAA AGCGGAAGCT
TTTGAAGAGT CCGTCAGAAT GCTGGATGCC GTAAAAATGC TGGAAGCGCG CAAACGGATG
AAAATGTACC CGCACGAATT TTCCGGCGGA ATGCGTCAAC GTGTGATGAT TGCGATGGCG
CTGTTGTGCA GGCCGAAACT GCTTATTGCC GATGAGCCTA CCACCGCGCT TGATGTTACC
GTGCAGGCGC AGATTATGAC CTTGCTTAAT GAGCTAAAGC GCGAATTTAA TACCGCCATT
ATCATGATTA CCCACGATCT GGGCGTGGTC GCGGGTATTT GCGATAAGGT CCTGGTAATG
TATGCCGGGC GTACCATGGA ATACGGTAAG GCGCGCGATG TCTTTTATCA GCCCGTTCAT
CCGTATTCGA TAGGCTTGCT TAATGCGGTG CCGCGTCTGG ATAGCGAGGG GGCGGAAATG
TTGACGATTC CGGGCAATCC TCCCAATTTA TTGCGTTTGC CTAAAGGTTG TCCGTTCCAG
CCGCGTTGTC CTCATGCGAT GGAGATCTGC AATAATGCGC CGCCACTTGA AGCGTTTAGT
CCTGGTCGCT TGCGCGCCTG TTTTAAACCG GTGGAGGAAC TGCTATGA
 
Protein sequence
MSLSETATQA PQPANVLLEV NDLRVTFATP DGDVTAVNDL NFTLRAGETL GIVGESGSGK 
SQTAFALMGL LATNGRIGGS ATFNGREILN LPERELNTLR AEQISMIFQD PMTSLNPYMR
VGEQLMEVLM LHKGMSKAEA FEESVRMLDA VKMLEARKRM KMYPHEFSGG MRQRVMIAMA
LLCRPKLLIA DEPTTALDVT VQAQIMTLLN ELKREFNTAI IMITHDLGVV AGICDKVLVM
YAGRTMEYGK ARDVFYQPVH PYSIGLLNAV PRLDSEGAEM LTIPGNPPNL LRLPKGCPFQ
PRCPHAMEIC NNAPPLEAFS PGRLRACFKP VEELL