Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1580 |
Symbol | |
ID | 6873691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1525957 |
End bp | 1526604 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642784727 |
Product | hypothetical protein |
Protein accession | YP_002215395 |
Protein GI | 198243875 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2095] Multiple antibiotic transporter |
TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.439502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTCAAC CGCTTTTTGA TTTTCCTGTT TACTTTAAGT TCTTTATCGG GCTCTTTGCG CTGGTTAACC CGGTGGGGAT TATCCCCGTT TTCATCAGCA TGACCAGCTA CCAGACGGCC ACGGCGCGTA ATAAAACTAA CCTCACCGCG AATCTGTCGG TTGCGATTAT CTTGTGGAGT TCCTTATTCC TCGGCGATGG CATCCTGCAG CTGTTTGGTA TTTCTATTGA CTCGTTCAGA ATTGCGGGCG GTATCCTGGT TGTCACCATT GCAATGTCGA TGATCAGCGG GAAGCTGGGG GAAGATAAAC AAAACAAGCA AGAAAAGTCA GAGACGGCCA TACGCGAGAG CATTGGCGTT GTGCCGTTAG CGCTGCCGTT AATGGCGGGG CCAGGGGCGA TCAGCTCCAC TATCGTCTGG GGGACGCGTT ATCACAGCAT CGCGCATTTG CTTGGTTTTT CAGTTGCCAT TGCGCTTTTT GCGCTTTGCT GCTGGGGCGT GTTCCGTATG GCGCCGTGGC TGGTTCGTTT GCTGGGGCAA ACCGGTATCA ACGTTATTAC CCGAATCATG GGGTTGTTGT TAATGGCGCT CGGCATCGAA TTTATTGTCA CAGGAATAAA AGGCATTTTC CCCGGCTTGC TCAACTAA
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Protein sequence | MIQPLFDFPV YFKFFIGLFA LVNPVGIIPV FISMTSYQTA TARNKTNLTA NLSVAIILWS SLFLGDGILQ LFGISIDSFR IAGGILVVTI AMSMISGKLG EDKQNKQEKS ETAIRESIGV VPLALPLMAG PGAISSTIVW GTRYHSIAHL LGFSVAIALF ALCCWGVFRM APWLVRLLGQ TGINVITRIM GLLLMALGIE FIVTGIKGIF PGLLN
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