Gene SeD_A1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1580 
Symbol 
ID6873691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1525957 
End bp1526604 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content51% 
IMG OID642784727 
Producthypothetical protein 
Protein accessionYP_002215395 
Protein GI198243875 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.439502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCAAC CGCTTTTTGA TTTTCCTGTT TACTTTAAGT TCTTTATCGG GCTCTTTGCG 
CTGGTTAACC CGGTGGGGAT TATCCCCGTT TTCATCAGCA TGACCAGCTA CCAGACGGCC
ACGGCGCGTA ATAAAACTAA CCTCACCGCG AATCTGTCGG TTGCGATTAT CTTGTGGAGT
TCCTTATTCC TCGGCGATGG CATCCTGCAG CTGTTTGGTA TTTCTATTGA CTCGTTCAGA
ATTGCGGGCG GTATCCTGGT TGTCACCATT GCAATGTCGA TGATCAGCGG GAAGCTGGGG
GAAGATAAAC AAAACAAGCA AGAAAAGTCA GAGACGGCCA TACGCGAGAG CATTGGCGTT
GTGCCGTTAG CGCTGCCGTT AATGGCGGGG CCAGGGGCGA TCAGCTCCAC TATCGTCTGG
GGGACGCGTT ATCACAGCAT CGCGCATTTG CTTGGTTTTT CAGTTGCCAT TGCGCTTTTT
GCGCTTTGCT GCTGGGGCGT GTTCCGTATG GCGCCGTGGC TGGTTCGTTT GCTGGGGCAA
ACCGGTATCA ACGTTATTAC CCGAATCATG GGGTTGTTGT TAATGGCGCT CGGCATCGAA
TTTATTGTCA CAGGAATAAA AGGCATTTTC CCCGGCTTGC TCAACTAA
 
Protein sequence
MIQPLFDFPV YFKFFIGLFA LVNPVGIIPV FISMTSYQTA TARNKTNLTA NLSVAIILWS 
SLFLGDGILQ LFGISIDSFR IAGGILVVTI AMSMISGKLG EDKQNKQEKS ETAIRESIGV
VPLALPLMAG PGAISSTIVW GTRYHSIAHL LGFSVAIALF ALCCWGVFRM APWLVRLLGQ
TGINVITRIM GLLLMALGIE FIVTGIKGIF PGLLN