Gene SeD_A1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1574 
Symbol 
ID6872444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1517660 
End bp1518565 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content51% 
IMG OID642784721 
Producthypothetical protein 
Protein accessionYP_002215389 
Protein GI198242035 
COG category[R] General function prediction only 
COG ID[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.236033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAA TGAAAATAGG GCTGGCGCTG GGATCTGGCG CAGCGAGAGG ATGGTCTCAT 
ATTGGGGTCA TCAAAGCCCT CAAGCAAACA GGCATTGATA TTGATATCGT TGCAGGATGC
TCAATAGGTT CGCTGGTCGG CGCCGCGTAT GCCTGTAATA AATTATCGGC GCTTGAACAG
TGGGTATGTT CATTCCGCTA CTGGGATGTT TTACGCCTGA TGGATGTATC CTGGGGCAGA
GGAGGGTTGC TTCGCGGCGA ACGCGTATTT AATCACTATC GGGATATTAT GCCCGTCACG
GATTTTGACC ACTGTTCAAG ACGTTTTGGC GCGGTCGCGA CGAATCTTAG CACGGGACGA
GAGCTATGGT TTACTGAAGG CGATCTACAC CTTGCTGTAC GCGCGTCGTG CAGTATGCCA
GGGCTGATGT CTCCGGTTGA GCATAACGGT TACTGGCTGG TAGATGGCGC AGTCGTTAAT
CCGGTACCTG TTTCGTTAAC CAGGGCGCTG GGGGCTGATA TCGTTATTGC GGTAGACCTG
CAACATGATG CCCACCTCAT GCAGCAAGAT TTGCTCTCTG TAAATGTCGG GAATATCAAT
GAAGAGAGCG ATGATGCGCT GCCCTGGCAT AAGCGTTTAA AAGAACGTTT CAGTAGCCTG
ACTTCACGCC GTGGCGTGAG TTCGCCTGGG GCAATGGAAA TCATGACAAC CTCCATCCAG
GTGTTGGAAA ATCGTCTTAA ACGTAACCGT ATGGCTGGCG ATCCGCCTGA TATTCTCATT
CAACCATTCT GTCCGCAAAT CTCAACGCTG GATTTTCATC GCGCCCATGC CGCTATTGCG
GCGGGTCAGT TAGCCGTAGA GAAAAAGATG GACGAACTTA TACCCTTGGT GCGTACCGAC
GTTTAA
 
Protein sequence
MRKMKIGLAL GSGAARGWSH IGVIKALKQT GIDIDIVAGC SIGSLVGAAY ACNKLSALEQ 
WVCSFRYWDV LRLMDVSWGR GGLLRGERVF NHYRDIMPVT DFDHCSRRFG AVATNLSTGR
ELWFTEGDLH LAVRASCSMP GLMSPVEHNG YWLVDGAVVN PVPVSLTRAL GADIVIAVDL
QHDAHLMQQD LLSVNVGNIN EESDDALPWH KRLKERFSSL TSRRGVSSPG AMEIMTTSIQ
VLENRLKRNR MAGDPPDILI QPFCPQISTL DFHRAHAAIA AGQLAVEKKM DELIPLVRTD
V