| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1558 |
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| Symbol | |
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| ID | 6874351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1504633 |
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| End bp | 1506030 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642784710 |
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| Product | nitrite extrusion protein 1 |
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| Protein accession | YP_002215380 |
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| Protein GI | 198243489 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.431226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.0433169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACT CATCCGCCCC GGAAAGGGCA ACTGGCGCTG TTATCACGGA ATGGCGTCCG
GAAGATCCGG CATTCTGGCA GCAGCACGGC CATCGTGTCG CCAGCCGTAA TTTGTGGATT
TCTGTCCCGT GTTTACTGCT GGCGTTTTGC GTCTGGATGC TATTCAGCGC AGTGGCGGTG
AACCTGCCGA AAGTGGGATT TAATTTTACG ACCGATCAGC TCTTTATGTT GACTGCGCTG
CCATCTGTTT CCGGCGCGCT GCTACGGGTG CCTTACTCCT TTATGGTGCC GCTATTTGGC
GGACGTCGCT GGACAGCGTT CAGTACCGGT ATCCTCATCG TGCCCTGCGT ATGGTTAGGC
TTTGCCGTTC AGGATACCAG TACGCCATTT AGCACTTTCA TTATTATTTC CTTGCTGTGT
GGTTTTGCCG GCGCGAACTT TGCCTCCAGT ATGGCGAACA TCAGCTTTTT CTTTCCTAAA
CAAAAGCAGG GCGGCGCGCT GGGTCTGAAC GGTGGTCTGG GCAATATGGG CGTGAGTGTG
ATGCAGCTGG TTGCGCCGCT GGTGGTTTCG CTCTCTATCT TTGCCGCCTT TGGCAGCCAC
GGTGTAGAGC AGCCGGACGG TTCTCAGCTC TATCTGGCGA ACGCAGCCTG GATTTGGGTG
CCTTTCCTGG CCATTTTTAC GCTGGCGGCG TGGTTCGGCA TGAACGAACT GGCGACGTCT
AAGGCCTCGC TAAAAGAGCA ACTGCCGGTG CTCAAACGTG GTCATCTGTG GATCATGAGT
CTGCTGTATC TGGCGACCTT CGGATCGTTT ATCGGTTTCT CCGCGGGGTT CGCTATGCTG
TCTAAAACAC AATTCCCGGA TGTGCAGATC CTGCATTATG CGTTTTTCGG TCCGTTTATC
GGCGCGCTGG CGCGTTCGGC AGGCGGCGCA ATTTCTGACC GTCTGGGGGG GACTCGCGTC
ACGCTTATCA ACTTTGTCCT GATGGCGATT TTCAGCGGTC TGCTGTTCCT GACATTACCT
ACTGGCGGCG TTGGAGGTAG CTTTATCGCG TTCTACGGGG TATTTCTGGC GCTATTTCTG
ACGGCGGGGT TGGGGAGTGG CTCTACCTTC CAGATGATCT CCGTTATCTT CCGTAAACTG
ACGATGGACC GGGTTAAAGC GGAAGGCGGG TCGGACGAAA GAGCCATGCG TGAAGCGGCG
ACCGATACGG CGGCGGCGCT GGGCTTTATT TCCGCGATTG GCGCGATTGG CGGCTTTTTT
ATTCCGAAAG CGTTTGGTTC ATCTTTAGCA TTAACTGGTT CTCCAGTCGG CGCGATGAAA
GTCTTTCTTA TTTTCTATAT CGCCTGCGTC GTTATTACCT GGGCGGTATA TGGACGTCAT
TCTAAAAATA AAAAGTAA
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| Protein sequence | MSHSSAPERA TGAVITEWRP EDPAFWQQHG HRVASRNLWI SVPCLLLAFC VWMLFSAVAV
NLPKVGFNFT TDQLFMLTAL PSVSGALLRV PYSFMVPLFG GRRWTAFSTG ILIVPCVWLG
FAVQDTSTPF STFIIISLLC GFAGANFASS MANISFFFPK QKQGGALGLN GGLGNMGVSV
MQLVAPLVVS LSIFAAFGSH GVEQPDGSQL YLANAAWIWV PFLAIFTLAA WFGMNELATS
KASLKEQLPV LKRGHLWIMS LLYLATFGSF IGFSAGFAML SKTQFPDVQI LHYAFFGPFI
GALARSAGGA ISDRLGGTRV TLINFVLMAI FSGLLFLTLP TGGVGGSFIA FYGVFLALFL
TAGLGSGSTF QMISVIFRKL TMDRVKAEGG SDERAMREAA TDTAAALGFI SAIGAIGGFF
IPKAFGSSLA LTGSPVGAMK VFLIFYIACV VITWAVYGRH SKNKK
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