Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1540 |
Symbol | |
ID | 6873303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1488055 |
End bp | 1489740 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642784692 |
Product | putative sulfate transporter YchM |
Protein accession | YP_002215362 |
Protein GI | 198244029 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0985805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.161381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACAAAT TATTTTCCTC ACATGTGATG CCTTTCCGCG CTCTCATCGA TGCTTGCTGG AAAGAAAAAT ATACCGCCTC CCGGTTCACC CGCGATGTGA TAGCCGGGAT CACCGTCGGG ATTATTGCTA TCCCGCTGGC GATGGCGCTG GCAATTGGCA GTGGCGTTGC GCCGCAGTAT GGCCTCTATA CCTCCGCTGT CGCCGGGATC GTGATCGCGC TAACCGGCGG CTCGCGCTTT AGCGTTTCCG GCCCTACCGC CGCGTTTGTG GTGATTTTGT ATCCGGTATC GCAACAGTTT GGTCTGGCGG GCCTACTGGT CGCCACGCTG ATGTCGGGCT TCTTCCTGAT CCTTTTCGGC CTGGCGAGAC TGGGGCGATT GATTGAATAT ATCCCGGTGT CGGTCACGTT GGGTTTTACC TCAGGGATTG GTATTACCAT CGGTACCATG CAGATTAAAG ATTTTCTTGG TCTGCAGATG GCCCATGTGC CAGAGCACTA TTTGCAGAAA GTCGGCGCGC TGTTTATGGC GTTGCCCACC GTCAATATTG GCGATGCCGC CATTGGCGTG GTAACGCTGG GAACGTTGAT TTTCTGGCCG CGTCTCGGTA TTCGTCTGCC AGGACATCTT CCCGCGCTGC TGGCCGGTTG CGCCGTAATG GGGATTGTTA ATCTGCTGGG CGGCAATGTG GCGACTATCG GCTCACAGTT CCATTACGTT CTGGCTGACG GCACTCAGGG CAACGGCATC CCGCAGCTCC TGCCGCAACT GATGCTGCCG TGGAGTCTTC CTAGCTCCGA TTTCACGCTA AGCTGGGATT CACTGCGCGC GCTGCTGCCA GCGGCCTTCT CGATTGCAAT GCTGGGGGCA ATCGAATCAT TGCTCTGCGC CGTCGTGCTG GACGGCATGA CCGGCACCAA ACATAAAGCT AACAGCGAAC TTATCGGCCA GGGGCTGGGG AATATGGTCG CGCCGTTCTT TGGCGGCATC ACCGCCACCG CCGCGATTGC CCGCTCTGCC GCCAACGTCC GCGCTGGCGC GACCTCTCCC ATCTCGGCGG TAATTCACGC TATCCTGGTC ATTCTGGCGC TACTGGTCTT GGCCCCGCTA CTCTCCTGGC TGCCGCTTTC CGCGATGGCG GCGCTACTGC TGATGGTGGC ATGGAATATG AGTGAAGCCC ATAAAGTGGT GGATCTGTTA CGCCATGCGC CGAAAGACGA CATTATCGTT ATGCTGCTGT GCATGTCATT AACGGTTCTG TTTGATATGG TCATCGCCAT CAGCGTGGGG ATTGTCCTTG CTTCCCTGCT GTTTATGCGC CGTATTGCGC GAATGACTCG ACTTGCGCCG GTCAATGTTG ATGTACCTGA AGATGTGCTG GTGCTGCGTG TTATCGGTCC GCTCTTTTTC GCCGCGGCGG AAGGGCTGTT TACCGACCTT GAGTCACGTA TTAAGGGCAA ACGTATCGTC GTTCTGAAAT GGGACGCAGT ACCAGTGCTG GATGCAGGCG GGCTTGATGC TTTTCAGCGT TTTGTGAAGC GTCTGCCGGA GGGTTGCGAA TTGCGTATCA GTAATCTGGA GTTCCAACCG CTGCGCACAA TGGCGCGTGC CGGTATCAAA CCTATTCCTG GGCGTCTGAC CTTCTTCCCA AACAGGACGG AGGCGTTAGC GGATTTACTA AGTTAA
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Protein sequence | MNKLFSSHVM PFRALIDACW KEKYTASRFT RDVIAGITVG IIAIPLAMAL AIGSGVAPQY GLYTSAVAGI VIALTGGSRF SVSGPTAAFV VILYPVSQQF GLAGLLVATL MSGFFLILFG LARLGRLIEY IPVSVTLGFT SGIGITIGTM QIKDFLGLQM AHVPEHYLQK VGALFMALPT VNIGDAAIGV VTLGTLIFWP RLGIRLPGHL PALLAGCAVM GIVNLLGGNV ATIGSQFHYV LADGTQGNGI PQLLPQLMLP WSLPSSDFTL SWDSLRALLP AAFSIAMLGA IESLLCAVVL DGMTGTKHKA NSELIGQGLG NMVAPFFGGI TATAAIARSA ANVRAGATSP ISAVIHAILV ILALLVLAPL LSWLPLSAMA ALLLMVAWNM SEAHKVVDLL RHAPKDDIIV MLLCMSLTVL FDMVIAISVG IVLASLLFMR RIARMTRLAP VNVDVPEDVL VLRVIGPLFF AAAEGLFTDL ESRIKGKRIV VLKWDAVPVL DAGGLDAFQR FVKRLPEGCE LRISNLEFQP LRTMARAGIK PIPGRLTFFP NRTEALADLL S
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