| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1529 |
|---|
| Symbol | hybD |
|---|
| ID | 6873615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 1478628 |
|---|
| End bp | 1479224 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642784681 |
|---|
| Product | hydrogenase 1 maturation protease |
|---|
| Protein accession | YP_002215351 |
|---|
| Protein GI | 198244948 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.468604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.329104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCGC AACGCGTAGT GGTGATGGGG TTAGGAAACC TGCTGTGGGC CGATGAAGGA
TTCGGTATCC GGGTCGCGGA GCGTTTGTAT GCCCGATATC ACTGGCCTGA AGAGGTAGAA
ATTGTGGACG GCGGTACGCA AGGGCTAAAC CTGTTAGGTT ATGTTGAGCA AGCCAGCCAT
CTCCTGCTCC TTGACGCGAT CGATTACGGC CTGGCGCCGG GCAGCCTGCG AACCTATGCC
GGCGAGAAAA TCCCCGCGTA TCTCAGCGCC AAAAAAATGA GCCTGCATCA AAACAGTTTT
TCCGAAGTTC TGGCGCTGGC CGACATCCGC GGGCATCTGC CCTGTCACAT TGCGCTGGTC
GGTCTGCAAC CGGCGCACCT GGACGACTAC GGCGGTAGCC TGAGCGAAAT AGCTCGCGGC
CAGCTACCGG CGGCGGAACA GGCCGCCCTG GCGCAACTGG CCGCCTGGGG GATCGTACCG
CAGGCAAACG AGGTCGCACG CTGCCTGAAC AATAAATGCC TGTCGATGGA AAATTATGAG
GGAGTGCGCA TACGTCAGTA TCAGACACGT CTGGAGGGCA AAAGAAGTGG CGAATGA
|
|---|
| Protein sequence | MNAQRVVVMG LGNLLWADEG FGIRVAERLY ARYHWPEEVE IVDGGTQGLN LLGYVEQASH
LLLLDAIDYG LAPGSLRTYA GEKIPAYLSA KKMSLHQNSF SEVLALADIR GHLPCHIALV
GLQPAHLDDY GGSLSEIARG QLPAAEQAAL AQLAAWGIVP QANEVARCLN NKCLSMENYE
GVRIRQYQTR LEGKRSGE
|
|---|
| |