Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1505 |
Symbol | |
ID | 6871536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1456089 |
End bp | 1456748 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642784658 |
Product | hypothetical protein |
Protein accession | YP_002215328 |
Protein GI | 198242874 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.474935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCAAC ATCGTAACTG GCAAGGCGCC TTGCTTGATT ACCCGGTAAG TAAAGTGGTC TGCGTGGGCA GTAATTACGC AAATCACATC AAGGAGATGG GCAGCGCGAC GCCGGAAGAA CCCGTGCTTT TTATCAAGCC GGAAACCGCA TTGTGTGATA TTCGCCAGCC GCTGGCGATT CCGGCGGATA TGGGGGCTGT TCATCATGAA GTTGAGCTTG CTGTGCTGAT TGGCGCAACG CTCCGCCAGG CGACCGAAGA TCATGTACGT AAAGCGATAG CCGGTTATGG CGTGGCGCTT GATTTAACCC TGCGCGATAT TCAAGGGAAA ATGAAAAAGG CCGGACAGCC CTGGGAAAAA GCCAAAGGTT TTGATAACGC ATGTCCGATT TCAGGCTTCA TCCCTGTCGC GGCCTTCTGC GGCGATCCGC AAAATACGGT TATCGGACTT AACGTTAATG GCGAGGTTCG CCAGCAAGGG TCGACCGCGG ATATGATTCA TCCTATTGTG CCCCTTATCG CCTATATGAG CCGCTATTTT ACGCTCAAAG CCGGGGACGT GGTGCTAACC GGCACGCCGG CAGGCGTGGG GCCATTATTA AGCGGCGATG AGCTGGACAT TCGTTTTAAT GGCGAAACGT TGTCTACCCG CGTTCTGTAA
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Protein sequence | MYQHRNWQGA LLDYPVSKVV CVGSNYANHI KEMGSATPEE PVLFIKPETA LCDIRQPLAI PADMGAVHHE VELAVLIGAT LRQATEDHVR KAIAGYGVAL DLTLRDIQGK MKKAGQPWEK AKGFDNACPI SGFIPVAAFC GDPQNTVIGL NVNGEVRQQG STADMIHPIV PLIAYMSRYF TLKAGDVVLT GTPAGVGPLL SGDELDIRFN GETLSTRVL
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