Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1495 |
Symbol | |
ID | 6871258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1447279 |
End bp | 1449189 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642784649 |
Product | hypothetical protein |
Protein accession | YP_002215319 |
Protein GI | 198242702 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGACG ATTTTGCAGC AGATGGCCAA CTGGCCAAAG CGATAACCGG CTTTAAACCG CGCGAACCAC AGCGACAAAT GGCGGTTGCC GTAACACAAG CGATTGAAAA TGCGCAGCCT TTGGTTGTTG AAGCCGGCAC CGGAACCGGG AAGACCTATG CTTACCTCGC TCCGGCGTTG CGCGCCGGGA AAAAAGTCAT TATTTCGACC GGGTCGAAAG CGTTGCAGGA TCAACTCTAC AGCCGCGATC TGCCGACGGT AGCAAAAGCG TTGGCGTTTA CCGGTAAGAC GGCCCTGTTG AAAGGACGTT CAAACTACCT CTGCCTGGAG CGTCTGGAAC AACAAGCGCT GGCGGGCGGC GATTTACCGG TACAAACGTT AAGCGACGTG ATATTGCTGC GCTCCTGGTC AAATCAGACG CGGGATGGCG ATATCAGCAC CTGCGTCAGC GTGGCGGAGG ATTCCCAGGC CTGGCCGCTG GTCACCAGTA CCAACGACAA CTGCCTTGGC AGCGATTGCC CGCTCTACAA AGAGTGCTTT GTGGTGAAAG CGCGTAAAAA GGCGATGGAC GCGGATGTGG TGATTGTAAA CCACCACCTT TTTCTTGCGG ATATGGTGGT TAAAGAGAGC GGGTTTGGCG AACTTATCCC TCAGGCTGAA GTAATGATCT TCGATGAAGC CCACCAACTG CCTGACATCG CCAGCCAGTA TTTCGGACAA TCGCTCTCCA GCCGTCAGTT ACTGGATTTA GCAAAAGACA TCACCATCGC CTACCGGACG GAACTGAAAG ACACTCAACA GTTGCAAAAA TGCGCCGATC GCCTTGCCCA GAGCGCCCAG GATTTTCGTC TGCAACTGGG GGAGCCCGGC TACCGGGGAA ATTTGCGTGA ACTGTTAGCC GACTCGCGTA TCCAACGGGC ATTTTTACTG CTGGATGATA CGCTGGAGCT TTGTTACGAC GTGGCGAAGC TGTCGCTGGG CCGTTCGGCG CTGCTGGATG CGGCTTTTGA ACGCGCCACG CTATACCGTT CACGGCTGAA ACGCTTAAAA GAGATCAATC AGCCGGGATA CAGCTACTGG TATGAGTGCA CCTCGCGCCA TTTCACCCTG GCGCTGACGC CGCTCACCGT GGCGGACAAA TTCAAAGAGG TGATGGAACA GAAACCCGGT AGCTGGATTT TTACCTCAGC CACGTTATCG GTAAATGATG ATCTTCACCA CTTTACCGCC CGTCTGGGAA TTGAACAGGC AGAATCCATG CTGCTGCCCA GCCCATTCGA CTATACGCGC CAGGCGTTAC TCTGCGTACC GCGTAACCTA CCGCAAACCA ACCAGCCCGG CGCGGCGCGA CAGTTGGCGG CTATGCTCAG GCCGATTATT GAAGCCAATA ACGGGCGATG TTTTATGCTG TGCACCTCAC ACGCCATGAT GCGCGATCTG GCGGAGCAGT TTCGCGCCAC CATGACGCTG CCGGTATTGT TGCAAGGGGA AACCAGTAAA GGCCAACTGT TACAGCAATT TGTTAGCGCC GGCAACGCGC TGCTCGTCGC CACCAGCAGC TTCTGGGAAG GGGTGGACGT GCGCGGCGAT ACGTTATCTT TGGTGATTAT CGACAAATTG CCGTTTACTT CCCCGGACGA CCCGTTGTTA AAAGCGCGAA TGGAAGACTG TCGTTTGCGC GGTGGCGATC CGTTTGATGA GGTTCAACTG CCCGATGCGG TGATTACGCT GAAGCAGGGG GGGGGGCGGC TAATTCGCGA TGCGGACGAT CGCGGGGTGT TAGTGATTTG TGATAACCGG CTGGTGATGC GGCCCTATGG CGCCACGTTT CTCGCCAGCC TGCCTCCTGC GCCGCGCACG CGTGATATCG CCCGTGCCGT TCGCTTTCTT GCGATTCCAT CCGCCGAGTA A
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Protein sequence | MTDDFAADGQ LAKAITGFKP REPQRQMAVA VTQAIENAQP LVVEAGTGTG KTYAYLAPAL RAGKKVIIST GSKALQDQLY SRDLPTVAKA LAFTGKTALL KGRSNYLCLE RLEQQALAGG DLPVQTLSDV ILLRSWSNQT RDGDISTCVS VAEDSQAWPL VTSTNDNCLG SDCPLYKECF VVKARKKAMD ADVVIVNHHL FLADMVVKES GFGELIPQAE VMIFDEAHQL PDIASQYFGQ SLSSRQLLDL AKDITIAYRT ELKDTQQLQK CADRLAQSAQ DFRLQLGEPG YRGNLRELLA DSRIQRAFLL LDDTLELCYD VAKLSLGRSA LLDAAFERAT LYRSRLKRLK EINQPGYSYW YECTSRHFTL ALTPLTVADK FKEVMEQKPG SWIFTSATLS VNDDLHHFTA RLGIEQAESM LLPSPFDYTR QALLCVPRNL PQTNQPGAAR QLAAMLRPII EANNGRCFML CTSHAMMRDL AEQFRATMTL PVLLQGETSK GQLLQQFVSA GNALLVATSS FWEGVDVRGD TLSLVIIDKL PFTSPDDPLL KARMEDCRLR GGDPFDEVQL PDAVITLKQG GGRLIRDADD RGVLVICDNR LVMRPYGATF LASLPPAPRT RDIARAVRFL AIPSAE
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