Gene SeD_A1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1478 
SymbolcspC 
ID6872654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1431947 
End bp1432156 
Gene Length210 bp 
Protein Length69 aa 
Translation table11 
GC content47% 
IMG OID642784633 
Productcold shock-like protein CspC 
Protein accessionYP_002215303 
Protein GI198245948 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000112944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.636634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA TTAAAGGTCA AGTTAAGTGG TTCAACGAAT CCAAAGGTTT TGGCTTCATT 
ACTCCGGCTG ACGGCAGCAA AGATGTGTTC GTACACTTCT CCGCTATCCA GGGCAATGGT 
TTCAAAACTC TGGCTGAAGG CCAGAACGTT GAGTTCGAAA TTCAGGACGG CCAGAAAGGT 
CCGGCTGCTG TTAACGTAAC AGCTATCTGA
 
Protein sequence
MAKIKGQVKW FNESKGFGFI TPADGSKDVF VHFSAIQGNG FKTLAEGQNV EFEIQDGQKG 
PAAVNVTAI