Gene SeD_A1471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1471 
Symbol 
ID6873898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1426763 
End bp1427644 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content53% 
IMG OID642784627 
Productheat shock protein HtpX 
Protein accessionYP_002215297 
Protein GI198245839 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.411691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.222056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAA TCGCGCTCTT CCTGCTGACG AACCTGGCCG TGATGGTCGT TTTCGGGCTG 
GTTCTGAGCC TGACAGGGAT ACAGTCGAGC AGCGTGCAAG GCTTGCTGAT CATGGCGCTG
CTGTTTGGTT TTGGCGGTTC TTTTATTTCA TTGCTGATGT CCAAATGGAT GGCGTTAAAA
TCCGTAGGAG GGGAAGTTAT TGAACAGCCT CGCAATGAAA GAGAACGCTG GTTGATGAAC
ACCGTAGCAA CGCAAGCGCG CCAGGCCGGT ATCGCCATGC CGCAGGTTGC TATCTACCAT
GCGCCGGACA TTAACGCGTT TGCGACGGGC GCACGCCGTG ACGCCTCATT GGTCGCTGTG
AGCACCGGTT TGTTGCAAAA CATGAGCCCT GACGAAGCGG AAGCCGTCAT TGCGCATGAA
ATCAGCCATA TTGCCAATGG CGATATGGTG ACGATGACGT TGATTCAGGG GGTGGTTAAC
ACCTTCGTTA TCTTTATTTC GCGCATTATC GCGCAAATTG CTGCTGGTTT TCTGGGCGGC
AACCGCGATG AAGGCGAAGG AAGTAACGGT AATCCGCTAA TCTATTTCGC CGTTGCGACG
GTGCTGGAAC TGGTCTTCGG TATTCTGGCG AGCATCATCA CCATGTGGTT CTCCCGTTAC
CGTGAGTTTC ATGCCGATGC GGGATCGGCG AAACTGGTTG GCCGTGAAAA AATGATTGCC
GCGTTGCAGC GCCTGAAAAC CAGCTACGAG CCGCAAGAAG CGACCAGCAT GATGGCGTTT
TGTATTAACG GTAAATCGAA ATCGTTAAGC GAGCTGTTTA TGACGCACCC ACCGCTGGAT
AAACGCATTG AAGCGCTGCG TAGCGGTGAG TACCTGAAAT AA
 
Protein sequence
MMRIALFLLT NLAVMVVFGL VLSLTGIQSS SVQGLLIMAL LFGFGGSFIS LLMSKWMALK 
SVGGEVIEQP RNERERWLMN TVATQARQAG IAMPQVAIYH APDINAFATG ARRDASLVAV
STGLLQNMSP DEAEAVIAHE ISHIANGDMV TMTLIQGVVN TFVIFISRII AQIAAGFLGG
NRDEGEGSNG NPLIYFAVAT VLELVFGILA SIITMWFSRY REFHADAGSA KLVGREKMIA
ALQRLKTSYE PQEATSMMAF CINGKSKSLS ELFMTHPPLD KRIEALRSGE YLK