| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1469 |
|---|
| Symbol | proQ |
|---|
| ID | 6874959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 1423816 |
|---|
| End bp | 1424502 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642784625 |
|---|
| Product | putative solute/DNA competence effector |
|---|
| Protein accession | YP_002215295 |
|---|
| Protein GI | 198242733 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00111252 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.239206 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC AACCTAAGTT GAATAGCAGT AAAGAAGTTA TCGCGTTTCT GGCCGAGCGT
TTTCCTCACT GTTTTAGTGC GGAAGGCGAA GCTCGCCCGC TGAAAATTGG TATTTTTCAG
GATCTGGTAG AGCGAGTTGG GGGCGAAATG AACCTCAGCA AAACGCAACT TCGTTCCGCT
TTACGTCTTT ATACTTCAAG CTGGCGTTAC CTGTACGGCG TTAAGCCGGG CGCAACGCGC
GTCGACCTTG ATGGCAATCC GTGCGGCGAG CTGGAAGAAC AGCATGTCGA ACATGCGCGT
AAGCAGCTTG AAGAAGCCAA AGCCCGTGTT CAGGCGCAGC GCGCAGAGCA GCAAGCGAAA
AAACGCGAAG CTGCCGCGGC GGCTGGCGAA AAAGAAGACG CGCCGCGACG CGAGCGTAAA
CCTCGCCCGG TAGCGCGTCG TAAAGAAGGC GCTGAACGTA AACCTCGCGC TGATAAACCG
ACGACGAAAG CGCCGCGTGC GCCTCGCGAA GAGAAGCACA CGCCGGTTTC TGATATTTCA
GTATTGACCG TAGGGCAGTC CCTCAAGGTG AAAGCGGGTA ATAATGCGAT GGATGCCACC
GTATTAGAAA TCACCAAAGA TGGTGTCCGT GTACAGCTGA ATTCGGGTAT GTCTTTGATT
GTACGCGCAG AACACCTGGT GTTCTGA
|
|---|
| Protein sequence | MENQPKLNSS KEVIAFLAER FPHCFSAEGE ARPLKIGIFQ DLVERVGGEM NLSKTQLRSA
LRLYTSSWRY LYGVKPGATR VDLDGNPCGE LEEQHVEHAR KQLEEAKARV QAQRAEQQAK
KREAAAAAGE KEDAPRRERK PRPVARRKEG AERKPRADKP TTKAPRAPRE EKHTPVSDIS
VLTVGQSLKV KAGNNAMDAT VLEITKDGVR VQLNSGMSLI VRAEHLVF
|
|---|
| |