Gene SeD_A1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1365 
Symboleda 
ID6871323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1341784 
End bp1342425 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content58% 
IMG OID642784533 
Productketo-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 
Protein accessionYP_002215203 
Protein GI198243890 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000000113151 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAACT GGAAAACAAG TGCAGAAGCA ATCCTGACCA CCGGCCCGGT TGTCCCGGTC 
ATTGTAGTCA ATAAACTGGA GCACGCGGTG CCGATGGCTA AAGCGCTGGT GGCCGGGGGC
GTTCGCGTTC TGGAAGTGAC TTTACGTACG GCCTGCGCGA TGGATGCAAT TCGCGCTATC
GCTAAAGACG TGCCGGAAGC GATTGTCGGC GCCGGAACCG TTCTCAATCC GCAGCAGTTG
GCGGAGGTGA CGGAAGCGGG CGCGCAATTT GCGATTAGCC CGGGACTGAC TGAGCCACTG
CTGAAAGCCG CGACGGCAGG CACTATCCCA TTGATTCCCG GTATTAGCAC CGTTTCTGAA
CTGATGTTGG GCATGGACTA TGGTCTGAAA GAGTTCAAAT TCTTCCCGGC GGAAGCGAAT
GGCGGCACTA AAGCGTTGCA GGCGATTGCC GGCCCGTTCT CTCAGGTACG TTTCTGCCCA
ACCGGCGGCA TCTCTCCGGC AAACTATCGT GACTATCTGG CGCTGAAAAG CGTGTTGTGC
ATCGGCGGTT CCTGGCTGGT GCCGGCCGAC GCGCTGGAAG CGGGTGATTA CGATCGCATC
ACCAAACTGG CGCGCGAAGC GGTAGAAGGC GCGAAGCAGT AA
 
Protein sequence
MKNWKTSAEA ILTTGPVVPV IVVNKLEHAV PMAKALVAGG VRVLEVTLRT ACAMDAIRAI 
AKDVPEAIVG AGTVLNPQQL AEVTEAGAQF AISPGLTEPL LKAATAGTIP LIPGISTVSE
LMLGMDYGLK EFKFFPAEAN GGTKALQAIA GPFSQVRFCP TGGISPANYR DYLALKSVLC
IGGSWLVPAD ALEAGDYDRI TKLAREAVEG AKQ