Gene SeD_A1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1356 
SymbolznuC 
ID6875057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1331174 
End bp1331980 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content52% 
IMG OID642784524 
Producthigh-affinity zinc transporter ATPase 
Protein accessionYP_002215194 
Protein GI198245100 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.00420991 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAATGTG ATATTATAAC ATTCTATCAC TTCTGCAAGC CTAAAATTAA CATGACAAGT 
TTAGTTTCAC TGGAAAACGT CTCGGTCTCA TTTGGTCAAC GCCGCGTCCT CTCTGACGTG
TCGCTTGAAT TGAGCCCCGG AAAAATTTTA ACGCTTCTCG GTCCTAACGG CGCGGGGAAG
TCAACGCTTG TACGCGTGGT TTTAGGACTG GTAGCCCCTG ATGATGGGGT GATCAAGCGC
AACGGGCAAC TCCGTATCGG CTATGTCCCG CAAAAGCTCT ATCTCGATAC CACGCTTCCG
CTGACGGTAA ACCGATTTTT ACGTTTACGT CCCGGCACGC AAAAAACGGA TATTCTCCCG
GCGCTTAAAC GCGTTCAGGC CGGACATTTG ATTGACGCGC CCATGCAAAA ACTCTCCGGC
GGTGAGACAC AGCGCGTACT GCTGGCGCGT GCTCTGCTTA ACAGGCCGCA GTTGCTGGTA
CTTGATGAGC CGACGCAAGG CGTGGATGTC AACGGCCAGG TCGCGTTATA CGACCTTATC
GATCAGCTGC GTCGCGAACT CGATTGCGCC GTGCTGATGG TGTCGCATGA CCTACATCTG
GTCATGGCAA AGACGGATGA AGTGTTATGC CTGAACCATC ATATTTGCTG TTCCGGCGCG
CCGGAAGTGG TGTCTATGCA TCCGGAATTT ATCTCTATGT TTGGCCCGCG AGGCGCGGAG
CAATTAGGGA TTTATCGCCA TCATCATAAT CATCGCCATG ATTTACAGGG TCGTATTGTA
CTGCGCCGGG GAAATGGTCA CTCATGA
 
Protein sequence
MKCDIITFYH FCKPKINMTS LVSLENVSVS FGQRRVLSDV SLELSPGKIL TLLGPNGAGK 
STLVRVVLGL VAPDDGVIKR NGQLRIGYVP QKLYLDTTLP LTVNRFLRLR PGTQKTDILP
ALKRVQAGHL IDAPMQKLSG GETQRVLLAR ALLNRPQLLV LDEPTQGVDV NGQVALYDLI
DQLRRELDCA VLMVSHDLHL VMAKTDEVLC LNHHICCSGA PEVVSMHPEF ISMFGPRGAE
QLGIYRHHHN HRHDLQGRIV LRRGNGHS