| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1354 |
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| Symbol | ruvB |
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| ID | 6871725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1329303 |
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| End bp | 1330313 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642784522 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_002215192 |
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| Protein GI | 198242097 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.00473129 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAGAAG CAGATCGCCT GATTTCAGCA GGCGCCACGA TTGCAGAAGA CGTTGCCGAT
CGCGCCATTC GCCCCAAGTT ATTGGCGGAA TATGTCGGCC AACCGCAGGT GCGCTCCCAG
ATGGAGATCT TTATTCAGGC GGCAAAACGG CGTGGCGACG CATTAGATCA CTTGCTGATT
TTCGGCCCGC CAGGGTTAGG TAAAACGACT CTGGCGAATA TCGTTGCCAA TGAAATGGGC
GTCAACCTCC GAACCACGTC CGGCCCGGTG CTGGAAAAAG CAGGCGATCT GGCGGCTATG
CTCACCAATC TTGAACCGCA TGATGTGCTG TTTATTGATG AGATCCACCG GCTTTCACCG
GTGGTGGAAG AGGTACTCTA TCCGGCGATG GAAGATTACC AGTTGGATAT TATGATTGGC
GAAGGGCCTG CTGCACGTTC AATTAAGATC GATCTGCCGC CGTTTACGCT CATTGGCGCG
ACGACGCGAG CAGGTTCGCT GACCTCGCCG CTACGTGACC GTTTTGGTAT TGTGCAGCGC
CTGGAGTTCT ACCAGGTGCC CGATCTGCAG CACATCGTCG GGCGCAGCGC AAGGCACATG
GGGCTTGAGA TGAGCGATGA CGGCGCGCTG GAAGTGGCGC GTCGGGCGCG CGGTACGCCG
CGTATAGCCA ACCGCCTGCT CAGACGTGTG CGTGATTTTG CCGAGGTGAA GCATGACGGG
GCTATTTCAG CGGAAATTGC CGCGCAGGCG CTGGATATGC TGAACGTCGA TGCGGAAGGA
TTTGACTATA TGGATCGTAA GCTGCTGCTG GCGGTTATTG ATAAATTCTT CGGTGGTCCG
GTGGGACTGG ATAACCTGGC GGCGGCGATT GGCGAAGAGC GTGAAACCAT TGAGGATGTG
CTGGAGCCGT ATCTGATTCA GCAAGGCTTT TTGCAGCGCA CGCCGCGTGG GCGTATGGCA
ACGGTGCGCG CCTGGAACCA TTTCGGGATC ACGCCGCCAG AGATGCCTTA G
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| Protein sequence | MIEADRLISA GATIAEDVAD RAIRPKLLAE YVGQPQVRSQ MEIFIQAAKR RGDALDHLLI
FGPPGLGKTT LANIVANEMG VNLRTTSGPV LEKAGDLAAM LTNLEPHDVL FIDEIHRLSP
VVEEVLYPAM EDYQLDIMIG EGPAARSIKI DLPPFTLIGA TTRAGSLTSP LRDRFGIVQR
LEFYQVPDLQ HIVGRSARHM GLEMSDDGAL EVARRARGTP RIANRLLRRV RDFAEVKHDG
AISAEIAAQA LDMLNVDAEG FDYMDRKLLL AVIDKFFGGP VGLDNLAAAI GEERETIEDV
LEPYLIQQGF LQRTPRGRMA TVRAWNHFGI TPPEMP
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