Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1353 |
Symbol | ruvA |
ID | 6872240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1328683 |
End bp | 1329294 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642784521 |
Product | Holliday junction DNA helicase RuvA |
Protein accession | YP_002215191 |
Protein GI | 198242475 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.760741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.00521266 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATAGGCA GACTCAGAGG CATTATTCTC GAAAAACAAC CCCCGATCGT GCTGCTGGAG ACAGGGGGAG TAGGCTATGA AGTACATATG CCTATGACCT GCTTTTACGA GCTGCCGGAG GCCGGGCAGG AGGCAATCGT CTTCACCCAC TTCGTGGTGC GTGAAGATGC GCAGTTGCTG TACGGATTTA ACAATAAGCA AGAGCGCACG CTATTTAAAG AGCTAATTAA AACGAATGGC GTCGGGCCTA AGCTGGCGCT GGCGATCCTC TCCGGCATGT CGGCGCAACA GTTCGTCAAT GCGGTTGAGC GCGAAGAGCT TGGTGCGCTG GTGAAGCTGC CGGGTATCGG CAAGAAAACT GCCGAACGAT TGATTGTTGA AATGAAAGAC CGCTTTAAAG GGCTACATGG CGATCTCTTC ACGCCTGCGG TCGATCTGGT ATTGACATCG CCGGCCAGCC CAACCTCGGA AGATGCAGAA CAAGAAGCAG TTGCTGCGCT GGTGGCGCTG GGTTATAAAC CGCAAGAAGC CAGCCGGATG GTAAGCAAGA TCGCCCGTCC GGACGCAAGC AGTGAAACAC TGATTCGCGA CGCGTTACGC GCCGCGCTAT GA
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Protein sequence | MIGRLRGIIL EKQPPIVLLE TGGVGYEVHM PMTCFYELPE AGQEAIVFTH FVVREDAQLL YGFNNKQERT LFKELIKTNG VGPKLALAIL SGMSAQQFVN AVEREELGAL VKLPGIGKKT AERLIVEMKD RFKGLHGDLF TPAVDLVLTS PASPTSEDAE QEAVAALVAL GYKPQEASRM VSKIARPDAS SETLIRDALR AAL
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