Gene SeD_A1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1320 
SymbolflhC 
ID6872288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1296707 
End bp1297285 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content51% 
IMG OID642784488 
Producttranscriptional activator FlhC 
Protein accessionYP_002215158 
Protein GI198243477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000170782 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones1 
Fosmid unclonability p-value3.16651e-27 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTGAAA AAAGCATTGT TCAGGAAGCT CGCGATATCC AGTTGGCGAT GGAGTTGATT 
AATCTTGGCG CTCGTCTACA AATGCTGGAA AGCGAAACAC AGCTCAGCCG TGGTCGCCTC 
ATCAGGCTGT ACAAAGAATT ACGCGGTAGC CCGCCGCCTA AAGGGATGCT GCCATTTTCG 
ACAGACTGGT TTATGACCTG GGAGCAAAAT ATTCATGCCT CCATGTTCTG CAACGCCTGG 
CAATTTTTAC TGAAGACTGG CTTATGCAGC GGTGTGGATG CGGTGATTAA AGCTTATCGG 
CTTTATCTTG AGCAGTGTCC GCAACCGCCT GAAGGGCCGT TGTTGGCGCT GACTCGCGCA 
TGGACGCTGG TGCGTTTTGT TGAAAGTGGG TTGCTTGAAT TGTCGAGCTG TAACTGCTGC 
GGTGGGAACT TTATTACCCA TGCGCATCAG CCCGTGGGCA GCTTTGCGTG TAGTTTATGC 
CAGCCGCCAT CCCGCGCAGT AAAAAGACGT AAACTTTCCC GAGATGCTGC CGATATTATT 
CCACAACTGC TGGATGAACA GATCGAACAG GCTGTTTAA
 
Protein sequence
MSEKSIVQEA RDIQLAMELI NLGARLQMLE SETQLSRGRL IRLYKELRGS PPPKGMLPFS 
TDWFMTWEQN IHASMFCNAW QFLLKTGLCS GVDAVIKAYR LYLEQCPQPP EGPLLALTRA 
WTLVRFVESG LLELSSCNCC GGNFITHAHQ PVGSFACSLC QPPSRAVKRR KLSRDAADII 
PQLLDEQIEQ AV