Gene SeD_A1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1289 
SymbolfliY 
ID6872919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1274429 
End bp1275229 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID642784459 
Productcystine transporter subunit 
Protein accessionYP_002215132 
Protein GI198244762 
COG category[T] Signal transduction mechanisms
[E] Amino acid transport and metabolism 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.000238805 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTAG CACTGCTGGG ACGTCAGGCA CTGATGGGAG TAATGGCTGT AGCGCTGGTG 
GCGGGAATGA GCGCGAAGAG CTTTGCCGAT GAGGGTTTGC TGAACAAAGT TAAAGAACGT
GGCACGCTGC TGGTAGGGCT GGAAGGTACC TATCCGCCGT TTAGCTTTCA GGGCGACGAC
GGCAAATTAA CCGGTTTTGA AGTCGATTTC GCCGAGGCGT TGGCAAAACA TCTGGGCGTT
AAAGCGTCGT TGAAGCCGAC CAAATGGGAC GGAATGCTGG CGTCACTGGA CTCTAAACGC
ATTGATGTGG TGATAAACCA GGTCACGATT TCAGACGTCC GCAAGAAAAA ATATGACTTC
TCTACGCCTT ACACTGTCTC CGGCGTTCAG GCGCTGGTGA AAAAAGGCAA TGAAGGCACG
ATCAAAACGG CTGCCGATCT GCAGGGCAAA AAAGTCGGCG TTGGGCTGGG GACTAACTAT
GAAGAGTGGC TACGTCAACA TGTTCAGGGC GTGGATATCC GTACTTATGA CGATGATCCT
ACAAAATACC AGGATCTACG CGTAGGCCGT ATTGACGCGA TTTTAGTCGA TCGTCTGGCG
GCGCTGGATC TGGTGAAAAA AACCAAAGGT ACGCTGGCCG TCACCGGTGA TGCGTTTTCG
CGTCAGGAGT CCGGCGTTGC GTTACGTAAA GGCAACGAAG ACTTGCTGAA GGCGGTAGAT
AACGCTATTG CGGAAATGCA AAAAGATGGC ACCTTAAAAG CGCTCTCTGA AAAATGGTTT
GGCGCTGACG TGACCCAATA A
 
Protein sequence
MKLALLGRQA LMGVMAVALV AGMSAKSFAD EGLLNKVKER GTLLVGLEGT YPPFSFQGDD 
GKLTGFEVDF AEALAKHLGV KASLKPTKWD GMLASLDSKR IDVVINQVTI SDVRKKKYDF
STPYTVSGVQ ALVKKGNEGT IKTAADLQGK KVGVGLGTNY EEWLRQHVQG VDIRTYDDDP
TKYQDLRVGR IDAILVDRLA ALDLVKKTKG TLAVTGDAFS RQESGVALRK GNEDLLKAVD
NAIAEMQKDG TLKALSEKWF GADVTQ