Gene SeD_A1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1282 
SymbolfliS 
ID6873951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1267871 
End bp1268278 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content50% 
IMG OID642784453 
Productflagellar protein FliS 
Protein accessionYP_002215126 
Protein GI198244060 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0299336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.268792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACCG CGAGCGGTAT CAAAGCTTAT GCGCAAGTCA GCGTGGAAAG CGCCGTGATG 
AGCGCCAGCC CGCATCAGTT GATTGAAATG TTGTTTGATG GCGCGAATAG CGCTCTGGTG
CGCGCTCGCC TGTTTTTAGA ACAAGGCGAT GTTGTCGCGA AAGGTGAAGC GTTAAGCAAA
GCCATCAATA TTATCGATAA CGGGCTGAAA GCCGGCCTCG ATCAGGAAAA AGGCGGTGAG
ATTGCGACGA ATCTTTCCGA GCTATACGAC TATATGATTC GCCGTTTACT GCAGGCTAAT
TTGCGTAACG ACGCTCAGGC CATCGAAGAA GTGGAAGGGT TACTCAGCAA TATTGCAGAA
GCCTGGAAGC AGATTTCACC GAAAGCATCT TTCCAGGAGT CTCGTTAA
 
Protein sequence
MYTASGIKAY AQVSVESAVM SASPHQLIEM LFDGANSALV RARLFLEQGD VVAKGEALSK 
AINIIDNGLK AGLDQEKGGE IATNLSELYD YMIRRLLQAN LRNDAQAIEE VEGLLSNIAE
AWKQISPKAS FQESR