| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1216 |
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| Symbol | |
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| ID | 6875047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1206170 |
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| End bp | 1206649 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642784395 |
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| Product | HNH endonuclease domain-containing protein |
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| Protein accession | YP_002215068 |
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| Protein GI | 198242614 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.516867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.131262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAATT TAATTTATTT AACACTGAAC GGTGAAAAGC AAGGATTGAT TTCAGCAGGT
TGTTGTTCCC TCGACTCTAT CGGTAATAAA GCACAGTTAC TGCACCTTGA TCATATTATG
GTATATGAAC TGACACATGG GTTAAGTCGG GATCAAAATG TCAATCATCA TTCAGTTACG
ATAAAAAAAC CTGTCGATAA ATCATCTCCT TTACTGGGAA AAGCAATTAA CGATAATGAA
ATATTGACCT GCACTTTTGA TTTTTATCGA ACAAATCGAT TTGGTATTAA TGAAAAATAT
TACAAACTGG AATTAAAAAA CGCCCGAATT AGTGATATTA ATTTCTCGAT TGCGCATGTA
GTCATTGACA GTGAAGCACA ACCTCAGGAA AGTATTTCTT TTATATATGA ATCCATAAAC
TGGGAACACT GTATTGCCGG GACCAGTGCA TTCAGTTTAT GGGATGAGAG GGTGTTTTAG
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| Protein sequence | MANLIYLTLN GEKQGLISAG CCSLDSIGNK AQLLHLDHIM VYELTHGLSR DQNVNHHSVT
IKKPVDKSSP LLGKAINDNE ILTCTFDFYR TNRFGINEKY YKLELKNARI SDINFSIAHV
VIDSEAQPQE SISFIYESIN WEHCIAGTSA FSLWDERVF
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