Gene SeD_A1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1204 
Symbol 
ID6872118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1196775 
End bp1197455 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content52% 
IMG OID642784385 
ProductN-acetylmannosamine-6-phosphate 2-epimerase 
Protein accessionYP_002215058 
Protein GI198245803 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3010] Putative N-acetylmannosamine-6-phosphate epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.924645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.216327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTAT TAGCCAGGCT GGAACAAAGT GTACACGAAA ACGGTGGGCT GATTGTCTCA 
TGCCAACCGG TACCAGGCAG CCCTATGGAT AAACCTGAAA TTGTGGCTGC AATGGCACAG
GCAGCGGCTT CGGCGGGTGC GGTCGCTGTG CGCATTGAAG GCATTGAGAA TCTGCGGGCT
GTTCGTCCCC ATCTTTCTGT TCCTATTATT GGGATAATTA AACGTGACCT TACAGGGTCG
CCAGTCCGTA TCACTCCCTA TTTACAGGAT GTTGACGCCC TGGCGCAGGC AGGTGCCGAT
ATTATCGCTT TTGATGCCTC ATTCCGCTCT CGCCCGGTTG ATATTGATAG TTTACTGACA
CGTATTCGCC TGCATGGATT ACTGGCGATG GCAGACTGTT CAACCGTGAA TGAAGGCATA
AGTTGCCATC AGAAAGGAAT CGAATTCATT GGTACAACAC TGTCTGGCTA TACCGGCCCC
ATCACGCCGG TTGAGCCAGA TTTGGCAATG GTGACACAAC TGAGCCATGC AGGTTGTCGT
GTTATTGCCG AGGGGCGCTA TAACACGCCT GCACTGGCGG CCAATGCTAT TGAGCATGGT
GCCTGGGCAG TTACCGTTGG TTCCGCTATC ACCCGTATCG AGCATATCTG TCAGTGGTTC
AGTCACGCAG TAAAACGCTG A
 
Protein sequence
MSLLARLEQS VHENGGLIVS CQPVPGSPMD KPEIVAAMAQ AAASAGAVAV RIEGIENLRA 
VRPHLSVPII GIIKRDLTGS PVRITPYLQD VDALAQAGAD IIAFDASFRS RPVDIDSLLT
RIRLHGLLAM ADCSTVNEGI SCHQKGIEFI GTTLSGYTGP ITPVEPDLAM VTQLSHAGCR
VIAEGRYNTP ALAANAIEHG AWAVTVGSAI TRIEHICQWF SHAVKR