Gene SeD_A1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1184 
Symbol 
ID6873734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1174832 
End bp1175770 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content53% 
IMG OID642784367 
Producthypothetical protein 
Protein accessionYP_002215040 
Protein GI198244580 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.454462 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA AAAGCGTCGC TATGCTGGCG GTTTGTATGC TGGCGCAAAG CCACCTTGCC 
ATTGCTGCCG GTACTCCTGC GCCTCAAGAG ATCAACATTG TTTTACTGGG CACCAAAGGC
GGGCCTTCTT TGCTCAATAC AGCCAGACTA CCGCAAGCGA CGGCGCTCAC TATCGGCGAT
AAAATATGGC TGATAGATGC CGGCTACGGC GCCAGTCTGC AACTGGTGAA AAACGGCATT
CCACTGCGCA ACATCAATAC TATTTTGCTC ACCCATCTGC ACAGCGACCA CATACTGGAT
TATCCTTCCT TGCTGATGAA TGCCTGGGCA AGTGGTCTGA AAGACCATAC CATACAGGTG
TATGGCCCGC CGGGAACCCA GGCGATGACG AAGGCTAGCT GGAAGGTCTT TGACAGGGAT
ATCACGCTAC GCATGGAGGA AGAGGGGAAA CCCGATCCGC GCAACCTGGT TAAGGCGACC
GATATTGGCC AGGGCGTCAT CTATAAAGAT GAACTGGTCA CAATAAGCGC GCTAAAAGTG
CCTCATTCCC CTTTCCCGGA CGGTGAAGCG TTTGCTTACC GTTTTGATAC CCAGGGTAAG
CGAATCGTCT TCTCTGGCGA TACGTCCTGG TTTCCGCCGC TTACAACGTT TGCCCAAGGG
GCGGATATCC TGGTACATGA GGCGGTACAT GTCCCTTCGG TAGCAAAACT GGCTAATAGT
ATTGGCAACG GAAAAACGCT GGCTGAAGCG ATTGCGTCGC ATCACACCAC GATTGAAGAT
GTCGGTAAGA TTGCTCGCGA GGCCCACGTG AAAAAACTGG TGTTAAGTCA TCTGGTGCCT
GCGACGGTTG CGGATGACGT CTGGCAACAG GAAGCCATGA AAAATTACCC GGGCCCTGTC
ATTGTCGGTC ATGACAATAT GACGATAAGC GTACCGTAG
 
Protein sequence
MMKKSVAMLA VCMLAQSHLA IAAGTPAPQE INIVLLGTKG GPSLLNTARL PQATALTIGD 
KIWLIDAGYG ASLQLVKNGI PLRNINTILL THLHSDHILD YPSLLMNAWA SGLKDHTIQV
YGPPGTQAMT KASWKVFDRD ITLRMEEEGK PDPRNLVKAT DIGQGVIYKD ELVTISALKV
PHSPFPDGEA FAYRFDTQGK RIVFSGDTSW FPPLTTFAQG ADILVHEAVH VPSVAKLANS
IGNGKTLAEA IASHHTTIED VGKIAREAHV KKLVLSHLVP ATVADDVWQQ EAMKNYPGPV
IVGHDNMTIS VP